BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029083
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]   217   2e-54
ref|XP_002530238.1| conserved hypothetical protein [Ricinus comm...   181   2e-43
gb|AEJ72555.1| putative retroelement polyprotein [Malus x domest...   153   5e-35
gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arab...   152   8e-35
gb|AAZ41812.1| 01P13-2 [Brassica rapa subsp. pekinensis]              152   8e-35

>emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]
          Length = 1355

 Score =  217 bits (553), Expect = 2e-54
 Identities = 112/243 (46%), Positives = 154/243 (63%), Gaps = 7/243 (2%)
 Frame = +2

Query: 5   SQDQLVMSWLLNSMEPNIAPIFTFSETAKDLWDSVQELYGHQNNAARIFELQQEIIDCNQ 184
           S+DQLVMSW+LNSME NIA IF++SE++ DLW++++++YG+QNN+ARIF++QQE+    Q
Sbjct: 82  SKDQLVMSWILNSMERNIAEIFSYSESSLDLWEALRDMYGNQNNSARIFQIQQEVNALRQ 141

Query: 185 GNETFTEHLSKLKIMWDELNIYRPPTTDLKTLQKRVEQDKVFRILASLKPEYEYIRSQVL 364
               F   L   K +W EL +YRP T D   L+KR E+D+VF++LASL  E+E +R  +L
Sbjct: 142 DGRPFVSLLGNFKSLWSELEVYRPHTVDPVVLKKRTEEDRVFQVLASLGSEFEDLRCHIL 201

Query: 365 MGSDVPSLANVCAAIHREETRMKVMGKEPKSVIEHVEASALIVDKRREDNKQGMKEQSFI 544
           M  ++PSL +VC+ I REE R KVM +E  +V    +  A I  K  E           I
Sbjct: 202 MSPELPSLKSVCSTIQREEVRRKVMIRE--TVTNSSDTRAYIAHKNYEGKS--------I 251

Query: 545 RTQGKGRRCEHCNKIGHSKDRCWILHPELKPKFEKSDR-------YDRAANNVTTDLSLS 703
           + +    +CEHCN  GH+ DRCW+LHPELKPKF K  R       ++  AN+ TT L   
Sbjct: 252 KGKRLDLKCEHCNAPGHTSDRCWVLHPELKPKFTKDKRGGDHKRGFNHKANDFTTYLQEK 311

Query: 704 VGQ 712
            GQ
Sbjct: 312 RGQ 314


>ref|XP_002530238.1| conserved hypothetical protein [Ricinus communis]
           gi|223530242|gb|EEF32144.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 317

 Score =  181 bits (459), Expect = 2e-43
 Identities = 95/245 (38%), Positives = 147/245 (60%), Gaps = 9/245 (3%)
 Frame = +2

Query: 5   SQDQLVMSWLLNSMEPNIAPIFTFSETAKDLWDSVQELYGHQNNAARIFELQQEIIDCNQ 184
           SQDQLV+SWLLNS+EP ++ IF++S ++ DLW +V+E++G  NNAAR+F+L++++ D  Q
Sbjct: 37  SQDQLVISWLLNSIEPKVSEIFSYSTSSFDLWIAVKEMFGDMNNAARVFQLKKDLSDLRQ 96

Query: 185 GNETFTEHLSKLKIMWDELNIYRPPTTDLKTLQKRVEQDKVFRILASLKPEYEYIRSQVL 364
            + +F + L   K  W+EL++YR  TTD   +  R E+DK+F++LA+L P+Y+ ++S ++
Sbjct: 97  SSRSFVQLLGLFKAKWNELDLYRLYTTDSTIILYRSEEDKMFQLLAALGPDYDDLKSHLI 156

Query: 365 MGSDVPSLANVCAAIHREETRMKVMGKEPKSVI----EHVEASALIVDKRREDNKQGMKE 532
           M   +PSL  VC  I REE   +VM     + +    +  EA A + + +R         
Sbjct: 157 MSPKLPSLQTVCNTIQREEVHRRVMNHNATANVVEGGQPAEARAFLSNTQRP-------- 208

Query: 533 QSFIRTQGKGRRCEHCNKIGHS-----KDRCWILHPELKPKFEKSDRYDRAANNVTTDLS 697
               R +    +C HC  IGHS     KD+CWILHPELKPK +   + +  A   +    
Sbjct: 209 ---YRGRQPDLKCSHCEHIGHSGIGHQKDKCWILHPELKPKQQNGYKENNKALYTSKANM 265

Query: 698 LSVGQ 712
            SVG+
Sbjct: 266 TSVGE 270


>gb|AEJ72555.1| putative retroelement polyprotein [Malus x domestica]
          Length = 1249

 Score =  153 bits (386), Expect = 5e-35
 Identities = 73/127 (57%), Positives = 97/127 (76%)
 Frame = +2

Query: 8   QDQLVMSWLLNSMEPNIAPIFTFSETAKDLWDSVQELYGHQNNAARIFELQQEIIDCNQG 187
           +DQLVMSWL NSM   ++ IF+FSE+A DLW +V+E+YG+QNNAARIFELQ+ +   NQ 
Sbjct: 83  KDQLVMSWLFNSMGSKVSEIFSFSESAFDLWKAVKEIYGNQNNAARIFELQKNLSVLNQD 142

Query: 188 NETFTEHLSKLKIMWDELNIYRPPTTDLKTLQKRVEQDKVFRILASLKPEYEYIRSQVLM 367
            +TF EHL +LK MW+ELN+YRP TTD   L K+ E+DKVF++L+SL   YE +RS +LM
Sbjct: 143 GKTFIEHLGRLKSMWNELNLYRPHTTDPAILLKQAEEDKVFQLLSSLDSTYEDLRSHILM 202

Query: 368 GSDVPSL 388
             ++P L
Sbjct: 203 SVELPPL 209


>gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1404

 Score =  152 bits (384), Expect = 8e-35
 Identities = 81/219 (36%), Positives = 127/219 (57%), Gaps = 4/219 (1%)
 Frame = +2

Query: 8   QDQLVMSWLLNSMEPNIAPIFTFSETAKDLWDSVQELYGHQNNAARIFELQQEIIDCNQG 187
           +DQ V++ L NS+E +I   +++ ETAK+LWD+++ +YG+++N  R+FE+++ I + +Q 
Sbjct: 66  EDQAVLALLQNSLETSILEGYSYCETAKELWDTLKNVYGNESNLTRVFEVKKAINELSQE 125

Query: 188 NETFTEHLSKLKIMWDELNIYRPPTTDLKTLQKRVEQDKVFRILASLKPEYEYIRSQVLM 367
           +  FT+H  K + +W EL   RP T D K L +R EQDKVF +L +L P Y  +   +L 
Sbjct: 126 DLEFTKHFGKFRSLWSELKSLRPGTLDPKILHERREQDKVFGLLLTLNPGYNDLIKHLLR 185

Query: 368 GSDVPSLANVCAAIHREETRMKVMGKEPKSVIEHVEASALIVDK---RREDNKQGMKEQS 538
              +PSL  VC+ I +E+    + G   KS +       ++ +K   + ED K       
Sbjct: 186 SEKLPSLDEVCSKIQKEQGSTGLFG--GKSELITANKGEVVANKGVYKNEDRKL------ 237

Query: 539 FIRTQGKGRRCEHCNKIGHSKDRCWILHPELKP-KFEKS 652
                     C+HC K GH+KD+CW+LHP LKP KF+ S
Sbjct: 238 --------LTCDHCKKKGHTKDKCWLLHPHLKPAKFKDS 268


>gb|AAZ41812.1| 01P13-2 [Brassica rapa subsp. pekinensis]
          Length = 558

 Score =  152 bits (384), Expect = 8e-35
 Identities = 83/232 (35%), Positives = 131/232 (56%), Gaps = 4/232 (1%)
 Frame = +2

Query: 2   QSQDQLVMSWLLNSMEPNIAPIFTFSETAKDLWDSVQELYGHQNNAARIFELQQEIIDCN 181
           Q +D LVM+ L  S++P I   +++ E+AK+LWD++++++G+ +N +R+FE++  I    
Sbjct: 68  QQEDMLVMTVLHASLDPAILDAYSYCESAKELWDTLKKVHGNTSNLSRVFEVKLAINRLA 127

Query: 182 QGNETFTEHLSKLKIMWDELNIYRPPTTDLKTLQKRVEQDKVFRILASLKPEYEYIRSQV 361
           Q +  FT+HL + + +W EL + RP TTD   L +R EQDKVF +L +L P Y  +   +
Sbjct: 128 QEDMEFTKHLGRFRSLWSELEMLRPSTTDPDQLNERREQDKVFGLLLTLNPAYTQLIQHM 187

Query: 362 LMGSDVPSLANVCAAIHREETRMKVMGKEPKSVIEHVEASALIVDKRREDNKQGMKEQSF 541
           L    +P L  VCA I RE+  M + G + +  + +  A         ED+ +  +    
Sbjct: 188 LRSDKLPDLEEVCAQIQREQGSMGLFGGKGELSLANQAA--------HEDSTEAPQANKA 239

Query: 542 IRTQGKGRR----CEHCNKIGHSKDRCWILHPELKPKFEKSDRYDRAANNVT 685
              + + R+    C+HC K GH K +CWILHP LKP     +R  RA  NVT
Sbjct: 240 SHGKYEDRKFNGNCDHCKKHGHKKSQCWILHPHLKPAKFMKEREGRA--NVT 289