BLASTX nr result

ID: Coptis23_contig00029066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029066
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28600.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002271203.1| PREDICTED: putative disease resistance prote...    86   2e-15
emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]    86   2e-15
ref|XP_002525457.1| leucine-rich repeat containing protein, puta...    83   3e-14
ref|XP_002267795.1| PREDICTED: putative disease resistance prote...    77   2e-12

>emb|CBI28600.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 38/69 (55%), Positives = 51/69 (73%)
 Frame = -2

Query: 288 DTANDIFNGLLWRSFFQDVEKDEDGNIVCCMMHDLVHDLACYITKNECSTVEVGKSENIP 109
           +  N+ FN LLWRSFF++V KD DGNIV C MH L HDLA  ++ ++CS VEVG+  +IP
Sbjct: 327 EVGNEYFNELLWRSFFENVTKDSDGNIVKCGMHHLFHDLARSVSGSDCSAVEVGRQVSIP 386

Query: 108 RCTRHLSLM 82
             TRH+S++
Sbjct: 387 AATRHISMV 395


>ref|XP_002271203.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 1179

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 38/69 (55%), Positives = 51/69 (73%)
 Frame = -2

Query: 288 DTANDIFNGLLWRSFFQDVEKDEDGNIVCCMMHDLVHDLACYITKNECSTVEVGKSENIP 109
           +  N+ FN LLWRSFF++V KD DGNIV C MH L HDLA  ++ ++CS VEVG+  +IP
Sbjct: 462 EVGNEYFNELLWRSFFENVTKDSDGNIVKCGMHHLFHDLARSVSGSDCSAVEVGRQVSIP 521

Query: 108 RCTRHLSLM 82
             TRH+S++
Sbjct: 522 AATRHISMV 530


>emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]
          Length = 1697

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 38/69 (55%), Positives = 51/69 (73%)
 Frame = -2

Query: 288 DTANDIFNGLLWRSFFQDVEKDEDGNIVCCMMHDLVHDLACYITKNECSTVEVGKSENIP 109
           +  N+ FN LLWRSFF++V KD DGNIV C MH L HDLA  ++ ++CS VEVG+  +IP
Sbjct: 462 EVGNEYFNELLWRSFFENVTKDSDGNIVKCGMHHLFHDLARSVSGSDCSAVEVGRQVSIP 521

Query: 108 RCTRHLSLM 82
             TRH+S++
Sbjct: 522 AATRHISMV 530


>ref|XP_002525457.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223535270|gb|EEF36947.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1177

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/95 (44%), Positives = 60/95 (63%)
 Frame = -2

Query: 288 DTANDIFNGLLWRSFFQDVEKDEDGNIVCCMMHDLVHDLACYITKNECSTVEVGKSENIP 109
           D  N  F  L+WRSFFQ   + EDG+I+ C +HDL+HDLA ++   ECS +E G ++ IP
Sbjct: 462 DMGNTYFKYLVWRSFFQVARECEDGSIISCKIHDLMHDLAQFVAGVECSVLEAGSNQIIP 521

Query: 108 RCTRHLSLMFGLSEASENVEFIHQLSPFLRTLLLL 4
           + TRHLSL+   ++ +EN+      +  L TLL L
Sbjct: 522 KGTRHLSLV--CNKVTENIPKCFYKAKNLHTLLAL 554


>ref|XP_002267795.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 928

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 9/94 (9%)
 Frame = -2

Query: 285 TANDIFNGLLWRSFFQDVEKDEDGNIVCCMMHDLVHDLACYITKNECSTVEVGKSENIPR 106
           T  D F  L+ RS FQD ++D++GNI+ C MHD+VHDLA Y+TKNEC  +E+   + +  
Sbjct: 465 TGGDYFEDLVSRSLFQDFDRDDEGNIISCKMHDIVHDLAQYLTKNECFILEIDDEKEVRM 524

Query: 105 CT-----RHLSLM----FGLSEASENVEFIHQLS 31
            +     RH +L+     G      N++++H LS
Sbjct: 525 ASSFQKARHATLISTPGAGFPSTIHNLKYLHTLS 558


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