BLASTX nr result

ID: Coptis23_contig00029060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029060
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40590.1| unknown [Lotus japonicus]                               77   1e-12
ref|NP_567098.2| FKBP-type peptidyl-prolyl cis-trans isomerase 6...    77   2e-12
ref|XP_002878331.1| immunophilin [Arabidopsis lyrata subsp. lyra...    77   2e-12
dbj|BAH57219.1| AT3G60370 [Arabidopsis thaliana]                       77   2e-12
ref|NP_001236089.1| uncharacterized protein LOC100305486 [Glycin...    73   3e-11

>gb|AFK40590.1| unknown [Lotus japonicus]
          Length = 246

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = -1

Query: 289 PPAGPSTFFSSKQFEVFDVELLNIQNCERIIILAFYSDVVCS 164
           PP GPSTFFS+KQFEVFDVELL IQNCER  +LAFYSDVVC+
Sbjct: 205 PPVGPSTFFSAKQFEVFDVELLGIQNCERRTVLAFYSDVVCN 246


>ref|NP_567098.2| FKBP-type peptidyl-prolyl cis-trans isomerase 6 [Arabidopsis
           thaliana] gi|122236257|sp|Q0WRJ7.1|FK202_ARATH RecName:
           Full=Peptidyl-prolyl cis-trans isomerase FKBP20-2,
           chloroplastic; Short=PPIase FKBP20-2; AltName:
           Full=FK506-binding protein 20-2; Short=AtFKBP20-2;
           AltName: Full=Immunophilin FKBP20-2; AltName:
           Full=Rotamase; Flags: Precursor
           gi|110736573|dbj|BAF00252.1| hypothetical protein
           [Arabidopsis thaliana] gi|119360117|gb|ABL66787.1|
           At3g60370 [Arabidopsis thaliana]
           gi|332646531|gb|AEE80052.1| FKBP-type peptidyl-prolyl
           cis-trans isomerase 6 [Arabidopsis thaliana]
          Length = 242

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -1

Query: 289 PPAGPSTFFSSKQFEVFDVELLNIQNCERIIILAFYSDVVCS 164
           PP GPSTFFSSKQFEVFDVELL+IQNCER  I+ FYSDV CS
Sbjct: 201 PPVGPSTFFSSKQFEVFDVELLSIQNCERRTIIGFYSDVTCS 242


>ref|XP_002878331.1| immunophilin [Arabidopsis lyrata subsp. lyrata]
           gi|297324169|gb|EFH54590.1| immunophilin [Arabidopsis
           lyrata subsp. lyrata]
          Length = 244

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -1

Query: 289 PPAGPSTFFSSKQFEVFDVELLNIQNCERIIILAFYSDVVCS 164
           PP GPSTFFSSKQFEVFDVELL+IQNCER  I+ FYSDV CS
Sbjct: 203 PPVGPSTFFSSKQFEVFDVELLSIQNCERRTIIGFYSDVTCS 244


>dbj|BAH57219.1| AT3G60370 [Arabidopsis thaliana]
          Length = 74

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -1

Query: 289 PPAGPSTFFSSKQFEVFDVELLNIQNCERIIILAFYSDVVCS 164
           PP GPSTFFSSKQFEVFDVELL+IQNCER  I+ FYSDV CS
Sbjct: 33  PPVGPSTFFSSKQFEVFDVELLSIQNCERRTIIGFYSDVTCS 74


>ref|NP_001236089.1| uncharacterized protein LOC100305486 [Glycine max]
           gi|255625657|gb|ACU13173.1| unknown [Glycine max]
          Length = 248

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = -1

Query: 289 PPAGPSTFFSSKQFEVFDVELLNIQNCERIIILAFYSDVVCS 164
           PP GPSTFFSSKQFEVFDVELL++QNCER  I AFYSDVVC+
Sbjct: 208 PPVGPSTFFSSKQFEVFDVELLSVQNCERRTI-AFYSDVVCN 248


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