BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029057
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004153206.1| PREDICTED: uncharacterized protein LOC101203...   177   1e-42
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       176   2e-42
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     172   2e-41
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   172   3e-41
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...   171   7e-41

>ref|XP_004153206.1| PREDICTED: uncharacterized protein LOC101203928, partial [Cucumis
           sativus]
          Length = 486

 Score =  177 bits (448), Expect = 1e-42
 Identities = 89/144 (61%), Positives = 110/144 (76%), Gaps = 1/144 (0%)
 Frame = +3

Query: 33  ESCLAGKATKKPF-GKAQRATYPLQLIHSDICGPMNVTARHGALYFITFTDDYTRYRTVY 209
           ESCL GK TK+ F GK  RA  PL+L+HSD+CGPMNV AR G  YFI+F DDY+RY  +Y
Sbjct: 276 ESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIY 335

Query: 210 LMSHKSDALDCFKKYKNLVENQLDRTIKALRTDRGREYLSDEFKELCENKGIARQLTIPY 389
           L+ HKS++L+ FK+YK  VEN+L +TIK LR+DRG EY+   F++     GI  QL+ P 
Sbjct: 336 LIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFQDYLIENGIKSQLSAPS 395

Query: 390 TPQQNGVSERRNRTLLEMVRSMMA 461
           TPQQNGVSERRNRTLL+MVRSMM+
Sbjct: 396 TPQQNGVSERRNRTLLDMVRSMMS 419


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  176 bits (446), Expect = 2e-42
 Identities = 87/144 (60%), Positives = 110/144 (76%), Gaps = 1/144 (0%)
 Frame = +3

Query: 33  ESCLAGKATKKPF-GKAQRATYPLQLIHSDICGPMNVTARHGALYFITFTDDYTRYRTVY 209
           ESCL GK TK+ F GK  RA  PL+L+HSD+CGPMNV AR G  YFI+F DD++RY  VY
Sbjct: 478 ESCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYGHVY 537

Query: 210 LMSHKSDALDCFKKYKNLVENQLDRTIKALRTDRGREYLSDEFKELCENKGIARQLTIPY 389
           L+ HKS++ + FK+YK  VEN++ +TIK LR+DRG EY+  +F++     GI  QL+ P 
Sbjct: 538 LLHHKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPS 597

Query: 390 TPQQNGVSERRNRTLLEMVRSMMA 461
           TPQQNGVSERRNRTLL+MVRSMM+
Sbjct: 598 TPQQNGVSERRNRTLLDMVRSMMS 621


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  172 bits (437), Expect = 2e-41
 Identities = 87/144 (60%), Positives = 111/144 (77%), Gaps = 1/144 (0%)
 Frame = +3

Query: 33  ESCLAGKATKKPF-GKAQRATYPLQLIHSDICGPMNVTARHGALYFITFTDDYTRYRTVY 209
           ESCL GK TK PF G ++RA+  L L+H+D+CGPM+ TAR G  YFITFTDD++RY  +Y
Sbjct: 473 ESCLLGKMTKAPFTGHSERASDLLALVHTDVCGPMSSTARGGYQYFITFTDDFSRYGYIY 532

Query: 210 LMSHKSDALDCFKKYKNLVENQLDRTIKALRTDRGREYLSDEFKELCENKGIARQLTIPY 389
           LM HKS++ + FK+++N V+N L +TIK LR+DRG EY+S EF    ++ GI  QLT P 
Sbjct: 533 LMRHKSESFEKFKEFQNEVQNHLGKTIKFLRSDRGGEYVSQEFGNHLKDCGIVPQLTPPG 592

Query: 390 TPQQNGVSERRNRTLLEMVRSMMA 461
           TPQ NGVSERRNRTLL+MVRSMM+
Sbjct: 593 TPQWNGVSERRNRTLLDMVRSMMS 616


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  172 bits (435), Expect = 3e-41
 Identities = 87/144 (60%), Positives = 110/144 (76%), Gaps = 1/144 (0%)
 Frame = +3

Query: 33  ESCLAGKATKKPF-GKAQRATYPLQLIHSDICGPMNVTARHGALYFITFTDDYTRYRTVY 209
           ESC+ GK TK PF G+ +RA+  L LIH+D+CGPM+ TAR G  YFITFTDDY+RY  +Y
Sbjct: 561 ESCILGKMTKTPFTGRNERASDLLALIHTDVCGPMSTTARGGFQYFITFTDDYSRYGYIY 620

Query: 210 LMSHKSDALDCFKKYKNLVENQLDRTIKALRTDRGREYLSDEFKELCENKGIARQLTIPY 389
           LM HKS++ + FK+++N V+NQL +TIK+LR+DRG E+LS EF    +  GI  QLT P 
Sbjct: 621 LMRHKSESFEKFKEFQNEVQNQLGKTIKSLRSDRGGEFLSQEFGNHLKQCGIVPQLTPPS 680

Query: 390 TPQQNGVSERRNRTLLEMVRSMMA 461
           TPQ NGVSER NRTLL+MVR MM+
Sbjct: 681 TPQWNGVSERCNRTLLDMVRLMMS 704


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550379|gb|ABA93176.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 938

 Score =  171 bits (432), Expect = 7e-41
 Identities = 88/144 (61%), Positives = 111/144 (77%), Gaps = 1/144 (0%)
 Frame = +3

Query: 33  ESCLAGKATKKPF-GKAQRATYPLQLIHSDICGPMNVTARHGALYFITFTDDYTRYRTVY 209
           ESCL GK TK PF G++++A+  L L+H+D+CGPM+ TAR G  YFITFT+D++RY  VY
Sbjct: 358 ESCLLGKMTKAPFTGQSEKASELLGLVHTDVCGPMSSTARGGFGYFITFTNDFSRYGYVY 417

Query: 210 LMSHKSDALDCFKKYKNLVENQLDRTIKALRTDRGREYLSDEFKELCENKGIARQLTIPY 389
           LM HKSD+ + FK+++N V+N L +TIK LR+DRG EYLS EF    +  GI  QLT P 
Sbjct: 418 LMRHKSDSFEKFKEFQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPG 477

Query: 390 TPQQNGVSERRNRTLLEMVRSMMA 461
           TPQ NGVSERRNRTLL+MVRSMM+
Sbjct: 478 TPQWNGVSERRNRTLLDMVRSMMS 501