BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029050
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   118   4e-25
ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm...   108   6e-22
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...   105   3e-21
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   102   3e-20
ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   100   2e-19

>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/100 (56%), Positives = 73/100 (73%)
 Frame = -2

Query: 358 YRLDKWEKTWVEVKSLGDRLLFLSDNCSFCAPASDLYGSKGNCIYFTDRYFQSFKVEESA 179
           +RLD+ E+ WVE++SLGDRLLFL D+ SF A ASD YG KGN I FT+  F S   E+ A
Sbjct: 285 FRLDQREQKWVEIESLGDRLLFLGDDSSFSARASDFYGCKGNSICFTNISFFSDAEEDDA 344

Query: 178 FNRHSIGVFSLENGSIAPLASYAGYSQLFWPPPMWITATT 59
               +IGVF L++GSI PL+SYA YS+  WPPP W+++T+
Sbjct: 345 SRSGTIGVFDLDSGSIGPLSSYANYSKTIWPPPAWVSSTS 384


>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
           gi|223532164|gb|EEF33970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/103 (48%), Positives = 66/103 (64%), Gaps = 7/103 (6%)
 Frame = -2

Query: 358 YRLDKWEKTWVEVKSLGDRLLFLSDNCSFCAPASDLYGSKGNCIYFTDRYFQSFKV---- 191
           ++LDK  +TW+EVKSLGDR+LFL D+ +F A  SDL G KGNCI+F D +F S       
Sbjct: 233 FKLDKEAQTWIEVKSLGDRVLFLGDDSTFSASVSDLSGCKGNCIFFVDNFFYSRDENLRA 292

Query: 190 ---EESAFNRHSIGVFSLENGSIAPLASYAGYSQLFWPPPMWI 71
              ++       IGVF LE G I PL +Y  Y+++FWPPP W+
Sbjct: 293 NGGDDGVLAGRDIGVFDLETGCIGPLGNYPEYAKMFWPPPHWL 335


>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/101 (47%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
 Frame = -2

Query: 358 YRLDKWEKTWVEVKSLGDRLLFLSDNCSFCAPASDLYGSKGNCIYFTDRYFQSFKV-EES 182
           ++L++  K+W+EVK+L DR+LFL D+ +F A AS+L G KGNCI+F D +F S +  ++ 
Sbjct: 294 FKLNEEGKSWIEVKNLEDRVLFLGDDSTFSASASELSGCKGNCIFFEDNFFYSREEGDDG 353

Query: 181 AFNRHSIGVFSLENGSIAPLASYAGYSQLFWPPPMWITATT 59
           +     IGVF LE+G I PL ++  YS++FWPPP WI +T+
Sbjct: 354 SMIGRDIGVFELESGCIGPLRNFPDYSKMFWPPPDWIASTS 394


>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 404

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
 Frame = -2

Query: 337 KTWVEVKSLGDRLLFLSDNCSFCAPASDLYGSKGNCIYFTDRYFQSFKVEESAFNRHSIG 158
           K W  V  LG+ +LFL +NCSF A AS + G KGNCI+FTD +      E+  F    I 
Sbjct: 295 KKWTVVCDLGNTMLFLGENCSFSASASGVSGCKGNCIFFTDGFLCPNVDEDDVFKGSDIA 354

Query: 157 VFSLENGSIAPLASYAGYSQLFWPPPMWITATTS*AG-GSEGVHRLQVA 14
           +F LE G+I+PL+    YS+LFWPPP WIT+T+  +   SEG + L V+
Sbjct: 355 IFDLEFGTISPLSDSPMYSRLFWPPPSWITSTSGGSSIHSEGTYSLMVS 403


>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 458

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/99 (49%), Positives = 63/99 (63%)
 Frame = -2

Query: 337 KTWVEVKSLGDRLLFLSDNCSFCAPASDLYGSKGNCIYFTDRYFQSFKVEESAFNRHSIG 158
           K W  V  LG+ +LFL +NCSF A AS + G KGNCI+FTD +      E+  F    I 
Sbjct: 295 KKWTVVCDLGNTMLFLGENCSFSASASGVSGCKGNCIFFTDGFLCPNVDEDDVFKGSDIA 354

Query: 157 VFSLENGSIAPLASYAGYSQLFWPPPMWITATTS*AGGS 41
           +F LE G+I+PL+    YS+LFWPPP WIT+T   +GGS
Sbjct: 355 IFDLEFGTISPLSDSPMYSRLFWPPPSWITST---SGGS 390