BLASTX nr result

ID: Coptis23_contig00029016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029016
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    56   3e-06

>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
 Frame = -3

Query: 271 ANQAEAMELMDTIGQFSAITSETINFENFGVHFSANMPYSDKQFIRRILGITIISSSNKY 92
           AN+ E   ++D + Q+   + + IN+E   V +S  +  S K  +  IL +  +    KY
Sbjct: 695 ANRQECTIIVDILNQYELASGQKINYEKSEVSYSRGVSVSQKDELTNILNMRQVDRHEKY 754

Query: 91  LGCPLF--ETKMEMLDSLISKIKGLIQGWKSK 2
           LG P     +K  + DSLI +I   +QGWK K
Sbjct: 755 LGIPSISGRSKKAIFDSLIDRIWKKLQGWKEK 786


Top