BLASTX nr result

ID: Coptis23_contig00029010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029010
         (1011 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274374.1| PREDICTED: zinc finger protein ZAT5 [Vitis v...   234   3e-59
ref|XP_002267645.1| PREDICTED: zinc finger protein ZAT5 [Vitis v...   214   2e-53
ref|XP_002313544.1| predicted protein [Populus trichocarpa] gi|2...   207   2e-51
emb|CBI30164.3| unnamed protein product [Vitis vinifera]              194   3e-47
ref|XP_002523729.1| conserved hypothetical protein [Ricinus comm...   194   4e-47

>ref|XP_002274374.1| PREDICTED: zinc finger protein ZAT5 [Vitis vinifera]
          Length = 296

 Score =  234 bits (596), Expect = 3e-59
 Identities = 138/261 (52%), Positives = 160/261 (61%), Gaps = 7/261 (2%)
 Frame = -2

Query: 764 EEVMGTPDHVLIVKGKRTKRQRPSSPLAALDMTTSNXXXXXXXXXXXXXXXXGHIYSYQS 585
           EE MG+ DH  IVKGKRTKRQR  SP   L   TS+                G   S  S
Sbjct: 5   EEFMGSSDHTQIVKGKRTKRQRTLSPFGVL--VTSSSSSGGGGGGGGGGGGGGDYSSISS 62

Query: 584 PTNSVXXXXXXXXXEDMANCLILLAQGHNTDVSKRIEDHVGAMEKFSSRRFAEAPTTTTS 405
           PT+S          EDMANCLILLAQG    +  R  +  GA+EK SS  F E  TTT  
Sbjct: 63  PTSSGEVLESTEEEEDMANCLILLAQG----LGPRQIEEGGAVEKLSSPSFTEMATTTAG 118

Query: 404 KAGFYVYQCKTCNRCFSSFQALGGHRASHKKPKAMVGEKK---TLMLLEDDT----QFNN 246
           KAGFYVY+CKTCNR F SFQALGGHRASHKKPKA+V EKK        +DD     QFN 
Sbjct: 119 KAGFYVYECKTCNRTFPSFQALGGHRASHKKPKAVVEEKKGPAATASWDDDYYEEGQFNK 178

Query: 245 NISSINLQMGNRTSSHTTNKSKVHECSICGSEFSSGQALGGHMRRHRTPTTANMTNSIAM 66
               ++LQ+GN  + H++NKSKVHECSICGSEFSSGQALGGHMRRHR+ T+  +T S+  
Sbjct: 179 ISPPLSLQIGNNKALHSSNKSKVHECSICGSEFSSGQALGGHMRRHRSNTSTRITMSMDA 238

Query: 65  DTIMTESQATKKPRNALSLDL 3
             + +     K+PRN L LDL
Sbjct: 239 GKMDSHDHHKKEPRNVLPLDL 259


>ref|XP_002267645.1| PREDICTED: zinc finger protein ZAT5 [Vitis vinifera]
           gi|147788170|emb|CAN64839.1| hypothetical protein
           VITISV_030377 [Vitis vinifera]
          Length = 276

 Score =  214 bits (546), Expect = 2e-53
 Identities = 133/260 (51%), Positives = 159/260 (61%), Gaps = 4/260 (1%)
 Frame = -2

Query: 770 IGEEVMGTPDHVLIVKGKRTKRQRPSSPLAALDMTTSNXXXXXXXXXXXXXXXXGHIYSY 591
           + EEVMG+ D   ++KGKRTKRQR SSPLA    ++S+                G   + 
Sbjct: 3   VQEEVMGSNDQTHVIKGKRTKRQRLSSPLALTMASSSSSGEEGDGGGRVSDNSGGVDRAT 62

Query: 590 QSPTNSVXXXXXXXXXE--DMANCLILLAQGHNTDVSKRIEDHVGAMEKFSSRRFAEAPT 417
            SPT S          E  DMANCLILLAQG +  V+                    A  
Sbjct: 63  TSPTTSTDHEFAESTEEEEDMANCLILLAQGQSRKVA------------------VPAAA 104

Query: 416 TTTSKA-GFYVYQCKTCNRCFSSFQALGGHRASHKKPKAMVGEKKTLMLLEDD-TQFNNN 243
            T+SKA GFYVYQCKTC RCF SFQALGGHRASHK+PKA+  EK+T  L+ED+  QFN+N
Sbjct: 105 ATSSKATGFYVYQCKTCYRCFPSFQALGGHRASHKRPKAVTEEKRTWALMEDEYDQFNHN 164

Query: 242 ISSINLQMGNRTSSHTTNKSKVHECSICGSEFSSGQALGGHMRRHRTPTTANMTNSIAMD 63
            ++++LQ+ NR   ++ NKSKVHECSICG+EFSSGQALGGHMRRHRT T    T  + M 
Sbjct: 165 STALSLQIPNR-GLYSNNKSKVHECSICGAEFSSGQALGGHMRRHRTFTGPPPT--MPMA 221

Query: 62  TIMTESQATKKPRNALSLDL 3
           T   ESQ  KKPRN L LDL
Sbjct: 222 TSSPESQEAKKPRNILQLDL 241


>ref|XP_002313544.1| predicted protein [Populus trichocarpa] gi|222849952|gb|EEE87499.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  207 bits (528), Expect = 2e-51
 Identities = 132/274 (48%), Positives = 164/274 (59%), Gaps = 20/274 (7%)
 Frame = -2

Query: 764 EEVMGTPDHVLIVKGKRTKRQRPSSPLAALDMTTSNXXXXXXXXXXXXXXXXGHIYSYQS 585
           +E MG+ D   IVKGKRTKRQR SSP     + TS                     S  S
Sbjct: 8   DEFMGSNDLTQIVKGKRTKRQRSSSPHK---VATSCSSSGYGGGGGERGVLIEEYGSISS 64

Query: 584 PTNSVXXXXXXXXXEDMANCLILLAQGHNTDVS-KRIEDHVGA-MEKFSSRRFAEAPTTT 411
           PT S          EDMANCLILLAQG   DV  K+I ++ G+ +EKFS+R+F++    T
Sbjct: 65  PTTSSEVCESTEEEEDMANCLILLAQG---DVPPKQIHENKGSKVEKFSARKFSDMSAPT 121

Query: 410 TSKAGFYVYQCKTCNRCFSSFQALGGHRASHKKPKAMVGEKKTLMLLE-----DDTQFNN 246
            +KAGF+VY+CKTCNRCF SFQALGGHRASHK+PKA   E+K  +++      DD Q N 
Sbjct: 122 INKAGFFVYECKTCNRCFPSFQALGGHRASHKRPKATAPEEKKGLVVASMEDLDDRQLNK 181

Query: 245 N--ISSINLQMGNRTS---SHTTNKSKVHECSICGSEFSSGQALGGHMRRHRTPTTANMT 81
                 ++LQ+ N  +       NK+K+HECSICGSEF SGQALGGHMRRHR  T AN  
Sbjct: 182 RSPYPCLSLQIPNNNNVNKGFQANKAKIHECSICGSEFMSGQALGGHMRRHRANTGANQV 241

Query: 80  NSIAMD--TIMTESQA------TKKPRNALSLDL 3
           ++I+ D  +  TES+       T KPRN L+LDL
Sbjct: 242 SNISTDSSSATTESKIHGDHHHTIKPRNMLALDL 275


>emb|CBI30164.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  194 bits (493), Expect = 3e-47
 Identities = 120/240 (50%), Positives = 143/240 (59%), Gaps = 8/240 (3%)
 Frame = -2

Query: 770 IGEEVMGTPDHVLIVKGKRTKRQRPSSPLAALDMTTSNXXXXXXXXXXXXXXXXGHIYSY 591
           + EEVMG+ D   ++KGKRTKRQR SSPLA    +T+                       
Sbjct: 3   VQEEVMGSNDQTHVIKGKRTKRQRLSSPLALTMASTTT---------------------- 40

Query: 590 QSPTNSVXXXXXXXXXE--DMANCLILLAQGHNTDVSKRIEDHVGAMEKFSSRRFAEAPT 417
            SPT S          E  DMANCLILLAQG +  V+                    A  
Sbjct: 41  -SPTTSTDHEFAESTEEEEDMANCLILLAQGQSRKVA------------------VPAAA 81

Query: 416 TTTSKA-GFYVYQCKTCNRCFSSFQALGGHRASHKKPKAMVGEKKTLMLLEDD-TQFNNN 243
            T+SKA GFYVYQCKTC RCF SFQALGGHRASHK+PKA+  EK+T  L+ED+  QFN+N
Sbjct: 82  ATSSKATGFYVYQCKTCYRCFPSFQALGGHRASHKRPKAVTEEKRTWALMEDEYDQFNHN 141

Query: 242 ISSINLQMGNRTSSHTTNKSKVHECSICGSEFSSGQALGGHMRRHRT----PTTANMTNS 75
            ++++LQ+ NR   ++ NKSKVHECSICG+EFSSGQALGGHMRRHRT    P T  M  S
Sbjct: 142 STALSLQIPNR-GLYSNNKSKVHECSICGAEFSSGQALGGHMRRHRTFTGPPPTMPMATS 200


>ref|XP_002523729.1| conserved hypothetical protein [Ricinus communis]
           gi|223537033|gb|EEF38669.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 345

 Score =  194 bits (492), Expect = 4e-47
 Identities = 132/311 (42%), Positives = 163/311 (52%), Gaps = 52/311 (16%)
 Frame = -2

Query: 779 MEIIGEEVMGTPDHVLIVKGKRTKRQRPSSPLAALD----MTTSNXXXXXXXXXXXXXXX 612
           ME+  EE MG+ D   I+KGKRTKRQR SSP  A       ++S+               
Sbjct: 1   MELAQEEFMGSNDLTQIMKGKRTKRQRSSSPHKAAGGGGVSSSSSSGCGDGGGREKGVVI 60

Query: 611 XGHIYSYQSPTNSVXXXXXXXXXEDMANCLILLAQGHNTDVSKRIEDHVGAMEKFSSRRF 432
             +  S  S T+           EDMANCLILLAQG    +     ++   MEKFSSR+F
Sbjct: 61  EEYYGSISSYTSCSEVYESTEEEEDMANCLILLAQGDGPRIIDESNNNGTRMEKFSSRKF 120

Query: 431 AEAPTTT-TSKAGFYVYQCKTCNRCFSSFQALGGHRASHKKPK--------AMVGEKKTL 279
           ++  T T T+KAGFYVY+CKTCNR F SFQALGGHRASHKKPK        A+     T 
Sbjct: 121 SQVSTATNTNKAGFYVYECKTCNRSFPSFQALGGHRASHKKPKPEEKKAPLAVAAAATTS 180

Query: 278 ML------LEDDTQFNNNISS------------INLQMGNRTSSH-------TTNKSKVH 174
           M+      LEDD Q N + +S            ++LQ+    SS        + NK+K+H
Sbjct: 181 MVNDVDHNLEDDCQMNKSSTSSPDHQYHHHHHPLSLQISTINSSSSKGNFLGSNNKAKIH 240

Query: 173 ECSICGSEFSSGQALGGHMRRHRTPTTANMTNSIAMDTIMTESQATK------------- 33
           ECSICGSEF+SGQALGGHMRRHR    AN  N +A+ T   +  +               
Sbjct: 241 ECSICGSEFTSGQALGGHMRRHR----ANTNNQVALTTSTIDQTSVTTTNSINGCSDDRI 296

Query: 32  -KPRNALSLDL 3
            KPR  LSLDL
Sbjct: 297 IKPRTILSLDL 307


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