BLASTX nr result

ID: Coptis23_contig00029000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029000
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBA12005.1| putative auxin response factor 3/4, partial [Cyc...    58   7e-07
ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vit...    55   5e-06

>emb|CBA12005.1| putative auxin response factor 3/4, partial [Cycas rumphii]
          Length = 811

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = -3

Query: 201 PDKGWQVVYTDSEDDMMVVGDDPWK 127
           PDKGWQVVYTDSEDDMM+VGDDPW+
Sbjct: 714 PDKGWQVVYTDSEDDMMLVGDDPWQ 738


>ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
           gi|297746231|emb|CBI16287.3| unnamed protein product
           [Vitis vinifera]
          Length = 798

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = -3

Query: 201 PDKGWQVVYTDSEDDMMVVGDDPW 130
           PDKGWQ++YTDSE+DMMVVGDDPW
Sbjct: 714 PDKGWQILYTDSENDMMVVGDDPW 737


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