BLASTX nr result

ID: Coptis23_contig00028997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028997
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138985.1| PREDICTED: probable disease resistance prote...    78   8e-13
ref|XP_002332822.1| cc-nbs-lrr resistance protein [Populus trich...    77   1e-12
ref|XP_004172809.1| PREDICTED: disease resistance protein At4g27...    77   1e-12
ref|XP_002300459.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002332774.1| cc-nbs-lrr resistance protein [Populus trich...    77   2e-12

>ref|XP_004138985.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Cucumis sativus] gi|449477888|ref|XP_004155153.1|
           PREDICTED: probable disease resistance protein
           At4g27220-like [Cucumis sativus]
          Length = 1413

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
 Frame = +1

Query: 1   ARALRGKDEYLWDNALQQLKESVFSKVTP----VFSSIKMSYNYMQSEEHKMCFLFCSLF 168
           ARALR K   +W +AL QL+  VF  +      V+SS+K+SY+Y+ SEE K  FL CS+F
Sbjct: 349 ARALRNKPASIWKDALIQLRNPVFVNIREINKKVYSSLKLSYDYLDSEEAKSLFLLCSMF 408

Query: 169 PEDFKIDMEELFCYLTGEKLLGDGDTILVARRKFYVIV 282
           PED+ ID + L  Y  G  LL   +++  AR +   +V
Sbjct: 409 PEDYIIDCQVLHVYAMGMGLLHGVESVAQARNRITKLV 446


>ref|XP_002332822.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834210|gb|EEE72687.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 817

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
 Frame = +1

Query: 4   RALRGKDEYLWDNALQQLKESVFSKVTPV-----FSSIKMSYNYMQSEEHKMCFLFCSLF 168
           RALR K E  W    +QLK S F  +  +     ++ +K+SY+Y++S+E K+CFL C LF
Sbjct: 187 RALRDKSENQWKRVSKQLKNSQFVDMEQIEEKNAYACLKLSYDYLKSKETKLCFLLCCLF 246

Query: 169 PEDFKIDMEELFCYLTGEKLLGDGDTILVARRKFYVIV 282
           PED+ I +E+L  Y  G  L  DG+ I  AR + +V +
Sbjct: 247 PEDYNIPIEDLTRYAVGYGLHQDGEPIEDAREQVHVAI 284


>ref|XP_004172809.1| PREDICTED: disease resistance protein At4g27190-like, partial
           [Cucumis sativus]
          Length = 1308

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
 Frame = +1

Query: 1   ARALRGKDEYLWDNALQQLKE------SVFSKVTPVFSSIKMSYNYMQSEEHKMCFLFCS 162
           A+ALR K   +W++AL QLK       ++      V+ S+K+SY+ +  EE K+ FL CS
Sbjct: 350 AKALRNKPSDIWNDALDQLKSVDVFMTNIGEMDKKVYLSLKLSYDCLGYEEVKLLFLLCS 409

Query: 163 LFPEDFKIDMEELFCYLTGEKLLGDGDTILVARRKFYVIV 282
           +FPEDF IDMEEL  Y  G   L   DT++  RR+   +V
Sbjct: 410 MFPEDFSIDMEELHVYAMGMGFLHGVDTVVKGRRRIKKLV 449


>ref|XP_002300459.1| predicted protein [Populus trichocarpa] gi|222847717|gb|EEE85264.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
 Frame = +1

Query: 4   RALRGKDEYLWDNALQQLKESVFSKVTPV------FSSIKMSYNYMQSEEHKMCFLFCSL 165
           RALRGK    W+ A +QLKES F ++  +      ++ +K+SY+Y++ EE K CF+ C L
Sbjct: 42  RALRGKSRVQWEVASKQLKESQFVRMEQIDEQNNAYTCLKLSYDYLKYEETKSCFVLCCL 101

Query: 166 FPEDFKIDMEELFCYLTGEKLLGDGDTILVARRKFYVIV 282
           FPED+ I +E+L  Y  G  L  D + I  AR++  V +
Sbjct: 102 FPEDYDIPIEDLTRYAVGYGLHQDAEPIEDARKRVSVAI 140


>ref|XP_002332774.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834669|gb|EEE73132.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 813

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
 Frame = +1

Query: 4   RALRGKDEYLWDNALQQLKESVFSKVTPV------FSSIKMSYNYMQSEEHKMCFLFCSL 165
           RALRGK    W+ A +QLKES F ++  +      ++ +K+SY+Y++ EE K CF+ C L
Sbjct: 144 RALRGKSRVQWEVASKQLKESQFVRMEQIDEQNNAYTCLKLSYDYLKYEETKSCFVLCCL 203

Query: 166 FPEDFKIDMEELFCYLTGEKLLGDGDTILVARRKFYVIV 282
           FPED+ I +E+L  Y  G  L  D + I  AR++  V +
Sbjct: 204 FPEDYDIPIEDLTRYAVGYGLHQDAEPIEDARKRVSVAI 242


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