BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028979
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...    70   1e-12
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...    71   8e-11
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...    61   1e-07
emb|CBI26044.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...    60   2e-07

>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score = 69.7 bits (169), Expect(2) = 1e-12
 Identities = 31/50 (62%), Positives = 43/50 (86%)
 Frame = +1

Query: 319 SLFDELLHKNLSPTSLFQPLSSSMDSGPPHLTLLASNIYLSILLTPNSPV 468
           +L+DEL  KNLSP+SL  P++S+MDS PPH +LLAS+++LS+LL PN+PV
Sbjct: 44  TLYDELPSKNLSPSSLIPPIASAMDSSPPHHSLLASDVFLSLLLAPNAPV 93



 Score = 27.7 bits (60), Expect(2) = 1e-12
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +2

Query: 176 MEDTYRRIIXXXXXXXXXXXXXQPISEPTLQDLQSLFQNDTELIGTLFHYL 328
           ME+T  RII              P+SE TL DLQ L ++   L  TL+  L
Sbjct: 1   MEETVSRIISELEDLRGNPQPPPPLSEQTLMDLQFLLKH--SLTETLYDEL 49


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/50 (64%), Positives = 43/50 (86%)
 Frame = +1

Query: 319 SLFDELLHKNLSPTSLFQPLSSSMDSGPPHLTLLASNIYLSILLTPNSPV 468
           SL+DEL  KNLSP+SL  P++S+MDS PPH +LLAS+++LS+LL PN+PV
Sbjct: 54  SLYDELSSKNLSPSSLIPPIASAMDSSPPHHSLLASDVFLSLLLAPNAPV 103


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
           condensin, putative [Ricinus communis]
          Length = 1313

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = +1

Query: 313 IISLFDELLHKNLSPTSLFQPLSSSMDSGPPHLTLLASNIYLSILLTPNSPV 468
           +   F +L  K++S  SL  PL+S+MDSGP HL+LL+S  YLS+LL+PNSPV
Sbjct: 44  LAQFFIDLSSKSISIASLLSPLTSTMDSGPTHLSLLSSKSYLSLLLSPNSPV 95


>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/53 (52%), Positives = 42/53 (79%)
 Frame = +1

Query: 310 HIISLFDELLHKNLSPTSLFQPLSSSMDSGPPHLTLLASNIYLSILLTPNSPV 468
           HI  LF++L  +NLS +SL +P++S+MDS P  ++LLAS +YLS+LL+ N+PV
Sbjct: 52  HIDRLFEDLSSRNLSISSLIRPMASAMDSSPTDISLLASRVYLSLLLSLNAPV 104


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/53 (52%), Positives = 42/53 (79%)
 Frame = +1

Query: 310 HIISLFDELLHKNLSPTSLFQPLSSSMDSGPPHLTLLASNIYLSILLTPNSPV 468
           HI  LF++L  +NLS +SL +P++S+MDS P  ++LLAS +YLS+LL+ N+PV
Sbjct: 52  HIDRLFEDLSSRNLSISSLIRPMASAMDSSPTDISLLASRVYLSLLLSLNAPV 104