BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028970
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523406.1| RNA binding protein, putative [Ricinus commu...    45   7e-10
ref|XP_002297618.1| predicted protein [Populus trichocarpa] gi|2...    45   2e-09
emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]    49   9e-09
emb|CBI16556.3| unnamed protein product [Vitis vinifera]               49   9e-09
ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vi...    49   9e-09

>ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
           gi|223537356|gb|EEF38985.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 771

 Score = 45.1 bits (105), Expect(2) = 7e-10
 Identities = 19/26 (73%), Positives = 24/26 (92%)
 Frame = +3

Query: 3   SDSRLDQILQDPYGNYVIQAALNNSK 80
           S++ LDQ++QDPYGNYVIQAAL+ SK
Sbjct: 681 SNTHLDQVMQDPYGNYVIQAALHQSK 706



 Score = 43.1 bits (100), Expect(2) = 7e-10
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +1

Query: 160 QGAAHAALLEAIRPHVPAHRTSPY 231
           +GA HAAL+EAIRPHVP  RTSPY
Sbjct: 706 KGALHAALVEAIRPHVPVLRTSPY 729


>ref|XP_002297618.1| predicted protein [Populus trichocarpa] gi|222844876|gb|EEE82423.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score = 45.1 bits (105), Expect(2) = 2e-09
 Identities = 19/26 (73%), Positives = 24/26 (92%)
 Frame = +3

Query: 3   SDSRLDQILQDPYGNYVIQAALNNSK 80
           ++SRLDQ++QDP+GNYVIQAAL  SK
Sbjct: 560 NNSRLDQVMQDPFGNYVIQAALQQSK 585



 Score = 41.6 bits (96), Expect(2) = 2e-09
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +1

Query: 160 QGAAHAALLEAIRPHVPAHRTSPY 231
           +GA HAAL+EAIRPHVP  +TSPY
Sbjct: 585 KGALHAALVEAIRPHVPTLQTSPY 608


>emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
          Length = 1051

 Score = 48.9 bits (115), Expect(2) = 9e-09
 Identities = 21/26 (80%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   SDSRLDQILQDPYGNYVIQAALNNSK 80
           ++ R+DQI+QDPYGNYVIQAALNNSK
Sbjct: 692 NNPRIDQIMQDPYGNYVIQAALNNSK 717



 Score = 35.4 bits (80), Expect(2) = 9e-09
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +1

Query: 160 QGAAHAALLEAIRPHVPAHRTSPY 231
           +GA HAAL+E IR HV   RTSPY
Sbjct: 717 KGAIHAALIEVIRSHVHVLRTSPY 740


>emb|CBI16556.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score = 48.9 bits (115), Expect(2) = 9e-09
 Identities = 21/26 (80%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   SDSRLDQILQDPYGNYVIQAALNNSK 80
           ++ R+DQI+QDPYGNYVIQAALNNSK
Sbjct: 662 NNPRIDQIMQDPYGNYVIQAALNNSK 687



 Score = 35.4 bits (80), Expect(2) = 9e-09
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +1

Query: 160 QGAAHAALLEAIRPHVPAHRTSPY 231
           +GA HAAL+E IR HV   RTSPY
Sbjct: 687 KGAIHAALIEVIRSHVHVLRTSPY 710


>ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
          Length = 711

 Score = 48.9 bits (115), Expect(2) = 9e-09
 Identities = 21/26 (80%), Positives = 25/26 (96%)
 Frame = +3

Query: 3   SDSRLDQILQDPYGNYVIQAALNNSK 80
           ++ R+DQI+QDPYGNYVIQAALNNSK
Sbjct: 651 NNPRIDQIMQDPYGNYVIQAALNNSK 676



 Score = 35.4 bits (80), Expect(2) = 9e-09
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +1

Query: 160 QGAAHAALLEAIRPHVPAHRTSPY 231
           +GA HAAL+E IR HV   RTSPY
Sbjct: 676 KGAIHAALIEVIRSHVHVLRTSPY 699