BLASTX nr result

ID: Coptis23_contig00028967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028967
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298728.1| predicted protein [Populus trichocarpa] gi|2...   382   e-103
ref|XP_002518741.1| conserved hypothetical protein [Ricinus comm...   357   3e-96
gb|ADE76236.1| unknown [Picea sitchensis]                             320   3e-85
ref|XP_003607953.1| hypothetical protein MTR_4g085850 [Medicago ...   293   4e-77
ref|XP_004140806.1| PREDICTED: uncharacterized protein LOC101203...   293   6e-77

>ref|XP_002298728.1| predicted protein [Populus trichocarpa] gi|222845986|gb|EEE83533.1|
            predicted protein [Populus trichocarpa]
          Length = 433

 Score =  382 bits (980), Expect = e-103
 Identities = 192/313 (61%), Positives = 235/313 (75%), Gaps = 3/313 (0%)
 Frame = +1

Query: 1    LEPLLECRDPHGSRLNISAEIRLGIGLFRFATGSDYGDIARRFRVSESIARFCTKQLCRV 180
            LEPLLECRDP G+ +N+S+E+RLGIGLFR ATGS Y +IA RF V+ES+ RFC KQLCRV
Sbjct: 120  LEPLLECRDPIGTPINLSSELRLGIGLFRLATGSSYIEIAGRFGVTESVTRFCAKQLCRV 179

Query: 181  LCTNFRFWIAFPNANELESVASSFEGVSGFSNCCGVIGCTRFKVVKGGHC---NGENLGE 351
            LCTNFRFWIAFP + EL+ V+   EG++G  NCCGVI CTRF VVK   C   + + + +
Sbjct: 180  LCTNFRFWIAFPTSTELQLVSKDIEGLTGLPNCCGVIDCTRFNVVKRNDCKLASDDEVQD 239

Query: 352  ESVVAQIVVDNSFRILSIVAGFRGGKGDSRVLKCSTLYRDVEEGRLLNGSSIDIEAIAVP 531
            +S+  QIVVD+S RILSI+AGFRG K DSR+LK +TL  D+E  RLLN + + +  +A+ 
Sbjct: 240  DSIAVQIVVDSSSRILSIIAGFRGDKNDSRILKSTTLCHDIEGRRLLNATPVIVNGVAID 299

Query: 532  QYLVGNEGYPLLPWLMVPFVDPVPASHEDHFNVELKKMRQPALRTFASLKNWGVLNKPIE 711
            QYL+G+ GYPLLPWLMVPFVD VP S E+ FN     M   ALRT ASLKNWGVLNKP+E
Sbjct: 300  QYLIGDGGYPLLPWLMVPFVDVVPGSSEEKFNAANNLMHVFALRTIASLKNWGVLNKPVE 359

Query: 712  EEFKTAIACIGACSILHNALLMREDYSALSEEMGDYADHDQCSQYCPESSLEENTTVHKA 891
            EEFKTA+A IGACSILHN LLMRED SAL  ++ DY+ +DQ SQ+  ++  EEN T  KA
Sbjct: 360  EEFKTAVAFIGACSILHNVLLMREDDSALI-DVEDYSLYDQDSQFYKDAMTEENLTEKKA 418

Query: 892  STVRSALARKVQD 930
            S  R ALA +V +
Sbjct: 419  SDTRRALATRVTE 431


>ref|XP_002518741.1| conserved hypothetical protein [Ricinus communis]
            gi|223542122|gb|EEF43666.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 445

 Score =  357 bits (916), Expect = 3e-96
 Identities = 184/313 (58%), Positives = 237/313 (75%), Gaps = 5/313 (1%)
 Frame = +1

Query: 1    LEPLLECRDPHGSRLNISAEIRLGIGLFRFATGSDYGDIARRFRVSESIARFCTKQLCRV 180
            LEPLL+CRDP GS L++SAE+RLG+GLFR ATGS+Y +IA RF V+ES ARFC KQLCRV
Sbjct: 128  LEPLLDCRDPIGSPLSLSAELRLGVGLFRLATGSNYSEIADRFGVTESAARFCAKQLCRV 187

Query: 181  LCTNFRFWIAFPNANELESVASSFEGVSGFSNCCGVIGCTRFKVVKGGH----CNGENLG 348
            LCTNFRFW++FP+  EL+SV+++FE + G  NCCGVI   RF +VK        NG++  
Sbjct: 188  LCTNFRFWVSFPSPVELQSVSNAFEKLIGLPNCCGVIDSARFNLVKKADDKLASNGKDQ- 246

Query: 349  EESVVAQIVVDNSFRILSIVAGFRGGKGDSRVLKCSTLYRDVEEGRLLNGSSIDIEAIAV 528
            ++ + AQIVVD+S RILSIVAGFRG KG+SR+LK +TLY+D+E GR+LN S   +  +A+
Sbjct: 247  DDMIAAQIVVDSSSRILSIVAGFRGEKGNSRMLKSTTLYKDIEGGRVLNSSPEIVNGVAI 306

Query: 529  PQYLVGNEGYPLLPWLMVPFVDPVPASHEDHFNVELKKMRQPALRTFASLKNWGVLNKPI 708
             +YL+G   YPLLPWLMVPF+D +P S E+ FN     MR  +LR  ASLKNWGVL++PI
Sbjct: 307  NRYLIGGGRYPLLPWLMVPFLDALPGSCEEKFNKANDLMRVSSLRAIASLKNWGVLSRPI 366

Query: 709  EEEFKTAIACIGACSILHNALLMREDYSALSEEMGDYADHDQCSQYCPESSLEENTTVH- 885
            +EEFKTA+A IGACSILHNALLMRED SAL +  G    + QCSQ+  ++ +E+ + +  
Sbjct: 367  QEEFKTAVALIGACSILHNALLMREDDSALLDMGGYSLYNQQCSQHFMDAEVEDISRIDG 426

Query: 886  KASTVRSALARKV 924
            KAS +R+ALA KV
Sbjct: 427  KASEIRNALATKV 439


>gb|ADE76236.1| unknown [Picea sitchensis]
          Length = 368

 Score =  320 bits (821), Expect = 3e-85
 Identities = 161/302 (53%), Positives = 211/302 (69%), Gaps = 4/302 (1%)
 Frame = +1

Query: 64  RLGIGLFRFATGSDYGDIARRFRVSESIARFCTKQLCRVLCTNFRFWIAFPNANELESVA 243
           R+G+GLFR ATGS Y  +++RF  +E  AR CTK+LCRV+CTN +FW+A+P+  +L +V+
Sbjct: 65  RVGMGLFRLATGSTYQAVSQRFVSTEPTARLCTKELCRVICTNLKFWVAYPSPCDLPNVS 124

Query: 244 SSFEGVSGFSNCCGVIGCTRFKVVKGGH---CNGENLG-EESVVAQIVVDNSFRILSIVA 411
             F+ +SG  NCCG I CTRFK     +    N E+   ++SVV QIVVD S RILSI+ 
Sbjct: 125 DEFQTLSGLPNCCGAIDCTRFKFTNTNYPYIYNEEDDDLQQSVVTQIVVDCSSRILSIIT 184

Query: 412 GFRGGKGDSRVLKCSTLYRDVEEGRLLNGSSIDIEAIAVPQYLVGNEGYPLLPWLMVPFV 591
           GF+G KGDSRVL+ STLY D+EEGRLLN     ++ + V QYLVG+ GYPLLPWLMVP+ 
Sbjct: 185 GFKGNKGDSRVLRSSTLYADIEEGRLLNSPPFHLKGVPVRQYLVGDSGYPLLPWLMVPYT 244

Query: 592 DPVPASHEDHFNVELKKMRQPALRTFASLKNWGVLNKPIEEEFKTAIACIGACSILHNAL 771
           DPV  S ++ FN +   MRQ ALRT + L+ WG+L+KPIEE+ + A+ CIGAC+ILHN L
Sbjct: 245 DPVVTSCQEDFNSKHYVMRQAALRTLSCLRKWGILSKPIEEDVRVAVGCIGACAILHNIL 304

Query: 772 LMREDYSALSEEMGDYADHDQCSQYCPESSLEENTTVHKASTVRSALARKVQDDLNSNQP 951
           L RE  S + E   DYA HDQ SQY  ++++ E +   KAS +R+ALA K +D  NS Q 
Sbjct: 305 LAREGGSTILEGTEDYALHDQSSQYYRDANMAEYSIEKKASVIRNALAAKARDMRNSEQA 364

Query: 952 TS 957
            S
Sbjct: 365 IS 366


>ref|XP_003607953.1| hypothetical protein MTR_4g085850 [Medicago truncatula]
           gi|355509008|gb|AES90150.1| hypothetical protein
           MTR_4g085850 [Medicago truncatula]
          Length = 399

 Score =  293 bits (751), Expect = 4e-77
 Identities = 153/269 (56%), Positives = 192/269 (71%), Gaps = 3/269 (1%)
 Frame = +1

Query: 1   LEPLLECRDP-HGSRLNISAEIRLGIGLFRFATGSDYGDIARRFRVSESIARFCTKQLCR 177
           LEPLLECRDP +   LN++A +RLGIGLFR A+GSDY  IA +F V+ S+A+FC KQLCR
Sbjct: 98  LEPLLECRDPAYLLPLNLTAGVRLGIGLFRLASGSDYQQIANQFNVTVSVAKFCVKQLCR 157

Query: 178 VLCTNFRFWIAFPNANELESVASSFEGVSGFSNCCGVIGCTRFKVVKGGHCNGENLGEES 357
           VLCTNFRFW++FPNAN+  S+  +FE +SG  NC GV+  +RF++              S
Sbjct: 158 VLCTNFRFWVSFPNAND-RSILQNFESISGLPNCSGVVFSSRFQIAPS---TSPQQPHSS 213

Query: 358 VVAQIVVDNSFRILSIVAGFRGGKGDSRVLKCSTLYRDVEEGRLLNGSSIDIEAIAVPQY 537
           + AQIVVD++ RILSI AG+ G K D  +LK S+L+ D+EEG LLN  S++     V QY
Sbjct: 214 IAAQIVVDSTCRILSIAAGYFGHKTDYTILKASSLFNDIEEGSLLNAPSVN----GVNQY 269

Query: 538 LVGNEGYPLLPWLMVPFVDP--VPASHEDHFNVELKKMRQPALRTFASLKNWGVLNKPIE 711
           L+G+ GYPLLPWLMVPF D   V  S E+ FN     MR PA +T ASL+ WGVL+KP+ 
Sbjct: 270 LIGDSGYPLLPWLMVPFADNVCVTGSVEETFNAAHGLMRIPAFKTDASLRKWGVLSKPVR 329

Query: 712 EEFKTAIACIGACSILHNALLMREDYSAL 798
           EE K A+A IGACSILHN+LLMRED+SAL
Sbjct: 330 EEIKMAVAYIGACSILHNSLLMREDFSAL 358


>ref|XP_004140806.1| PREDICTED: uncharacterized protein LOC101203312 [Cucumis sativus]
           gi|449501700|ref|XP_004161442.1| PREDICTED:
           uncharacterized LOC101203312 [Cucumis sativus]
          Length = 386

 Score =  293 bits (750), Expect = 6e-77
 Identities = 154/310 (49%), Positives = 198/310 (63%)
 Frame = +1

Query: 1   LEPLLECRDPHGSRLNISAEIRLGIGLFRFATGSDYGDIARRFRVSESIARFCTKQLCRV 180
           LEPLLECRDP GS L++S EIRLG+GL+R ATG D+  I+ +F VSES+ARFC+KQLCRV
Sbjct: 118 LEPLLECRDPVGSPLDLSVEIRLGVGLYRLATGCDFSTISDQFGVSESVARFCSKQLCRV 177

Query: 181 LCTNFRFWIAFPNANELESVASSFEGVSGFSNCCGVIGCTRFKVVKGGHCNGENLGEESV 360
           LCTNFRFW+ FP  NELE  +S+FE ++G  NCCG                         
Sbjct: 178 LCTNFRFWVEFPCPNELELTSSAFEDLAGLPNCCG------------------------- 212

Query: 361 VAQIVVDNSFRILSIVAGFRGGKGDSRVLKCSTLYRDVEEGRLLNGSSIDIEAIAVPQYL 540
                             FRG K DS VL  STL++D+E+GRLLN   + +  +AV +YL
Sbjct: 213 ------------------FRGNKDDSTVLMSSTLFKDIEQGRLLNSPPVYLHGVAVNKYL 254

Query: 541 VGNEGYPLLPWLMVPFVDPVPASHEDHFNVELKKMRQPALRTFASLKNWGVLNKPIEEEF 720
            G+  YPLLPWL+VPF   V  S E+ FN   + M  PAL+   SL+NWGVL++PI EEF
Sbjct: 255 FGHGEYPLLPWLIVPFAGAVSGSTEESFNEAHRLMCIPALKAIVSLRNWGVLSQPIHEEF 314

Query: 721 KTAIACIGACSILHNALLMREDYSALSEEMGDYADHDQCSQYCPESSLEENTTVHKASTV 900
           KTA+A IGACSILHNALLMRED+SA+++E    +  D  SQY  E+ L  ++T  KAS +
Sbjct: 315 KTAVAYIGACSILHNALLMREDFSAMADEWESLSSLDHKSQYV-EAGLNVDSTNEKASVI 373

Query: 901 RSALARKVQD 930
           + ALA + ++
Sbjct: 374 QRALALRARE 383


Top