BLASTX nr result
ID: Coptis23_contig00028966
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00028966 (489 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 162 3e-38 ref|XP_002514051.1| Protein VERNALIZATION-INSENSITIVE, putative ... 143 2e-32 ref|XP_004163957.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 125 5e-27 ref|XP_004152742.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 125 5e-27 ref|XP_003615310.1| Protein VERNALIZATION INSENSITIVE [Medicago ... 120 9e-26 >ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis vinifera] Length = 617 Score = 162 bits (409), Expect = 3e-38 Identities = 92/155 (59%), Positives = 114/155 (73%) Frame = -2 Query: 467 MESDFSDFVFDREKYCQLSLEQKRELVHEIVQRSQDAPEILRSWNHEEIVEIISAEKGKE 288 MES FS FV D EK +LSL +KRELVHEI Q S+DAPEILRS+ E++EII AE GKE Sbjct: 1 MESAFSGFVLDPEKCSRLSLGEKRELVHEIAQWSKDAPEILRSFTRRELLEIICAEMGKE 60 Query: 287 MKFTGYTKSKMVERLIKFVLKKSHMDGTDGSIAISLAKTKVGSKRQRKKDYSLVLETGHS 108 K+TG+TK +M+E L+K + KKS + TD SIA S AKT++GSKRQRKK+ L T Sbjct: 61 RKYTGFTKFRMIEHLLKLISKKS-KNRTDNSIASSPAKTQIGSKRQRKKENPLQPLT-DL 118 Query: 107 DNFSLEKNENKHVTLFCQNLACRATLTPQNKFCKR 3 D+FS EK + TL CQNLACRA+L+P++ FCKR Sbjct: 119 DHFSPEKCKEVK-TLLCQNLACRASLSPEDAFCKR 152 >ref|XP_002514051.1| Protein VERNALIZATION-INSENSITIVE, putative [Ricinus communis] gi|223547137|gb|EEF48634.1| Protein VERNALIZATION-INSENSITIVE, putative [Ricinus communis] Length = 632 Score = 143 bits (360), Expect = 2e-32 Identities = 76/156 (48%), Positives = 103/156 (66%), Gaps = 1/156 (0%) Frame = -2 Query: 467 MESDFSDFVFDREKYCQLSLEQKRELVHEIVQRSQDAPEILRSWNHEEIVEIISAEKGKE 288 + +FS FV D + QLS+ +KREL+ EI QRS+DA EIL S+ E++EII AE GKE Sbjct: 13 VSGEFSGFVLDPAQCSQLSMGEKRELIREIAQRSEDATEILSSFTRRELLEIICAEMGKE 72 Query: 287 MKFTGYTKSKMVERLIKFVLKKSHMDGTDGSIAISLAKTKVGSKRQRKKDYSLVLETGHS 108 K++GYTK +M+E L+K V +KS + IA+S AKT+ G KRQRKK+ L L T + Sbjct: 73 RKYSGYTKLRMIEHLLKLVSQKSKRSNINDIIALSPAKTEAGFKRQRKKESQLQLSTDTN 132 Query: 107 DNFSLEKNENKHVTL-FCQNLACRATLTPQNKFCKR 3 + E + V L CQN+AC+ATL+P + FCKR Sbjct: 133 LVYEENNKEEEEVKLHVCQNIACKATLSPGDAFCKR 168 >ref|XP_004163957.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis sativus] Length = 619 Score = 125 bits (313), Expect = 5e-27 Identities = 64/139 (46%), Positives = 93/139 (66%) Frame = -2 Query: 419 QLSLEQKRELVHEIVQRSQDAPEILRSWNHEEIVEIISAEKGKEMKFTGYTKSKMVERLI 240 ++S+E+K+E++HEI Q+S+ A EILRS+ E++EII AE GKE K+TGYTKS+M+E L+ Sbjct: 28 KMSMEKKKEIIHEIAQKSKAATEILRSFTRRELLEIICAEMGKERKYTGYTKSQMIEHLL 87 Query: 239 KFVLKKSHMDGTDGSIAISLAKTKVGSKRQRKKDYSLVLETGHSDNFSLEKNENKHVTLF 60 K V +KS + + ++A KT+ KR RK D S V+ ++N S E +E Sbjct: 88 KLVSQKSE-NSSSPTLAFVRDKTQTSHKRPRKADQSSVVLLSSNNNASFETDEEFSEVKV 146 Query: 59 CQNLACRATLTPQNKFCKR 3 CQN+AC+A L P+ FCKR Sbjct: 147 CQNVACKAPLNPEFAFCKR 165 >ref|XP_004152742.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis sativus] Length = 616 Score = 125 bits (313), Expect = 5e-27 Identities = 64/139 (46%), Positives = 93/139 (66%) Frame = -2 Query: 419 QLSLEQKRELVHEIVQRSQDAPEILRSWNHEEIVEIISAEKGKEMKFTGYTKSKMVERLI 240 ++S+E+K+E++HEI Q+S+ A EILRS+ E++EII AE GKE K+TGYTKS+M+E L+ Sbjct: 28 KMSMEKKKEIIHEIAQKSKAATEILRSFTRRELLEIICAEMGKERKYTGYTKSQMIEHLL 87 Query: 239 KFVLKKSHMDGTDGSIAISLAKTKVGSKRQRKKDYSLVLETGHSDNFSLEKNENKHVTLF 60 K V +KS + + ++A KT+ KR RK D S V+ ++N S E +E Sbjct: 88 KLVSQKSE-NSSSPTLAFVRDKTQTSHKRPRKADQSSVVLLSSNNNASFETDEEFSEVKV 146 Query: 59 CQNLACRATLTPQNKFCKR 3 CQN+AC+A L P+ FCKR Sbjct: 147 CQNVACKAPLNPEFAFCKR 165 >ref|XP_003615310.1| Protein VERNALIZATION INSENSITIVE [Medicago truncatula] gi|355516645|gb|AES98268.1| Protein VERNALIZATION INSENSITIVE [Medicago truncatula] Length = 588 Score = 120 bits (302), Expect = 9e-26 Identities = 64/148 (43%), Positives = 95/148 (64%) Frame = -2 Query: 446 FVFDREKYCQLSLEQKRELVHEIVQRSQDAPEILRSWNHEEIVEIISAEKGKEMKFTGYT 267 F+ D K L+ + K+ LVHE+ ++S+DAP IL+++ E++E+I AE GKE K+TGYT Sbjct: 12 FLLDPAKCGVLNFQDKQRLVHEVARQSKDAPNILQAFTRRELLELICAELGKERKYTGYT 71 Query: 266 KSKMVERLIKFVLKKSHMDGTDGSIAISLAKTKVGSKRQRKKDYSLVLETGHSDNFSLEK 87 K +M+E L+K + KKS++ + A S +K+ +GSKR +K+ S L +N Sbjct: 72 KDQMIEYLLKLISKKSNLHVDQNAFAYSPSKSCIGSKR-KKEPPSPDLRNVQLEN----T 126 Query: 86 NENKHVTLFCQNLACRATLTPQNKFCKR 3 NE TL CQN+AC+ATL P+ FCKR Sbjct: 127 NEETMKTLVCQNVACKATLNPERSFCKR 154