BLASTX nr result

ID: Coptis23_contig00028966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028966
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   162   3e-38
ref|XP_002514051.1| Protein VERNALIZATION-INSENSITIVE, putative ...   143   2e-32
ref|XP_004163957.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   125   5e-27
ref|XP_004152742.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   125   5e-27
ref|XP_003615310.1| Protein VERNALIZATION INSENSITIVE [Medicago ...   120   9e-26

>ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 617

 Score =  162 bits (409), Expect = 3e-38
 Identities = 92/155 (59%), Positives = 114/155 (73%)
 Frame = -2

Query: 467 MESDFSDFVFDREKYCQLSLEQKRELVHEIVQRSQDAPEILRSWNHEEIVEIISAEKGKE 288
           MES FS FV D EK  +LSL +KRELVHEI Q S+DAPEILRS+   E++EII AE GKE
Sbjct: 1   MESAFSGFVLDPEKCSRLSLGEKRELVHEIAQWSKDAPEILRSFTRRELLEIICAEMGKE 60

Query: 287 MKFTGYTKSKMVERLIKFVLKKSHMDGTDGSIAISLAKTKVGSKRQRKKDYSLVLETGHS 108
            K+TG+TK +M+E L+K + KKS  + TD SIA S AKT++GSKRQRKK+  L   T   
Sbjct: 61  RKYTGFTKFRMIEHLLKLISKKS-KNRTDNSIASSPAKTQIGSKRQRKKENPLQPLT-DL 118

Query: 107 DNFSLEKNENKHVTLFCQNLACRATLTPQNKFCKR 3
           D+FS EK +    TL CQNLACRA+L+P++ FCKR
Sbjct: 119 DHFSPEKCKEVK-TLLCQNLACRASLSPEDAFCKR 152


>ref|XP_002514051.1| Protein VERNALIZATION-INSENSITIVE, putative [Ricinus communis]
           gi|223547137|gb|EEF48634.1| Protein
           VERNALIZATION-INSENSITIVE, putative [Ricinus communis]
          Length = 632

 Score =  143 bits (360), Expect = 2e-32
 Identities = 76/156 (48%), Positives = 103/156 (66%), Gaps = 1/156 (0%)
 Frame = -2

Query: 467 MESDFSDFVFDREKYCQLSLEQKRELVHEIVQRSQDAPEILRSWNHEEIVEIISAEKGKE 288
           +  +FS FV D  +  QLS+ +KREL+ EI QRS+DA EIL S+   E++EII AE GKE
Sbjct: 13  VSGEFSGFVLDPAQCSQLSMGEKRELIREIAQRSEDATEILSSFTRRELLEIICAEMGKE 72

Query: 287 MKFTGYTKSKMVERLIKFVLKKSHMDGTDGSIAISLAKTKVGSKRQRKKDYSLVLETGHS 108
            K++GYTK +M+E L+K V +KS     +  IA+S AKT+ G KRQRKK+  L L T  +
Sbjct: 73  RKYSGYTKLRMIEHLLKLVSQKSKRSNINDIIALSPAKTEAGFKRQRKKESQLQLSTDTN 132

Query: 107 DNFSLEKNENKHVTL-FCQNLACRATLTPQNKFCKR 3
             +     E + V L  CQN+AC+ATL+P + FCKR
Sbjct: 133 LVYEENNKEEEEVKLHVCQNIACKATLSPGDAFCKR 168


>ref|XP_004163957.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis
           sativus]
          Length = 619

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/139 (46%), Positives = 93/139 (66%)
 Frame = -2

Query: 419 QLSLEQKRELVHEIVQRSQDAPEILRSWNHEEIVEIISAEKGKEMKFTGYTKSKMVERLI 240
           ++S+E+K+E++HEI Q+S+ A EILRS+   E++EII AE GKE K+TGYTKS+M+E L+
Sbjct: 28  KMSMEKKKEIIHEIAQKSKAATEILRSFTRRELLEIICAEMGKERKYTGYTKSQMIEHLL 87

Query: 239 KFVLKKSHMDGTDGSIAISLAKTKVGSKRQRKKDYSLVLETGHSDNFSLEKNENKHVTLF 60
           K V +KS  + +  ++A    KT+   KR RK D S V+    ++N S E +E       
Sbjct: 88  KLVSQKSE-NSSSPTLAFVRDKTQTSHKRPRKADQSSVVLLSSNNNASFETDEEFSEVKV 146

Query: 59  CQNLACRATLTPQNKFCKR 3
           CQN+AC+A L P+  FCKR
Sbjct: 147 CQNVACKAPLNPEFAFCKR 165


>ref|XP_004152742.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis
           sativus]
          Length = 616

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/139 (46%), Positives = 93/139 (66%)
 Frame = -2

Query: 419 QLSLEQKRELVHEIVQRSQDAPEILRSWNHEEIVEIISAEKGKEMKFTGYTKSKMVERLI 240
           ++S+E+K+E++HEI Q+S+ A EILRS+   E++EII AE GKE K+TGYTKS+M+E L+
Sbjct: 28  KMSMEKKKEIIHEIAQKSKAATEILRSFTRRELLEIICAEMGKERKYTGYTKSQMIEHLL 87

Query: 239 KFVLKKSHMDGTDGSIAISLAKTKVGSKRQRKKDYSLVLETGHSDNFSLEKNENKHVTLF 60
           K V +KS  + +  ++A    KT+   KR RK D S V+    ++N S E +E       
Sbjct: 88  KLVSQKSE-NSSSPTLAFVRDKTQTSHKRPRKADQSSVVLLSSNNNASFETDEEFSEVKV 146

Query: 59  CQNLACRATLTPQNKFCKR 3
           CQN+AC+A L P+  FCKR
Sbjct: 147 CQNVACKAPLNPEFAFCKR 165


>ref|XP_003615310.1| Protein VERNALIZATION INSENSITIVE [Medicago truncatula]
           gi|355516645|gb|AES98268.1| Protein VERNALIZATION
           INSENSITIVE [Medicago truncatula]
          Length = 588

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/148 (43%), Positives = 95/148 (64%)
 Frame = -2

Query: 446 FVFDREKYCQLSLEQKRELVHEIVQRSQDAPEILRSWNHEEIVEIISAEKGKEMKFTGYT 267
           F+ D  K   L+ + K+ LVHE+ ++S+DAP IL+++   E++E+I AE GKE K+TGYT
Sbjct: 12  FLLDPAKCGVLNFQDKQRLVHEVARQSKDAPNILQAFTRRELLELICAELGKERKYTGYT 71

Query: 266 KSKMVERLIKFVLKKSHMDGTDGSIAISLAKTKVGSKRQRKKDYSLVLETGHSDNFSLEK 87
           K +M+E L+K + KKS++     + A S +K+ +GSKR +K+  S  L     +N     
Sbjct: 72  KDQMIEYLLKLISKKSNLHVDQNAFAYSPSKSCIGSKR-KKEPPSPDLRNVQLEN----T 126

Query: 86  NENKHVTLFCQNLACRATLTPQNKFCKR 3
           NE    TL CQN+AC+ATL P+  FCKR
Sbjct: 127 NEETMKTLVCQNVACKATLNPERSFCKR 154


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