BLASTX nr result

ID: Coptis23_contig00028956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028956
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282994.1| PREDICTED: calcium-dependent protein kinase ...   104   6e-21
gb|AFR11236.1| calcium dependent protein kinase 6, partial [Chen...   101   5e-20
emb|CAN78387.1| hypothetical protein VITISV_017368 [Vitis vinifera]   101   5e-20
ref|XP_002520611.1| calcium-dependent protein kinase, putative [...    98   6e-19
gb|AAL68972.1| calmodulin-like-domain protein kinase CPK2 [Cucur...    98   8e-19

>ref|XP_002282994.1| PREDICTED: calcium-dependent protein kinase 4 [Vitis vinifera]
          Length = 561

 Score =  104 bits (260), Expect = 6e-21
 Identities = 61/130 (46%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
 Frame = +3

Query: 57  MGNTCRGSFGDKYIDDGYYNTKPSDXXXXXXXXXXXXXXXXXXXXXXXXXQQIIAEELFK 236
           MGNTCRGSF  KY   GY   +                            Q+   E   K
Sbjct: 1   MGNTCRGSFRGKYFQ-GYGQPEEQSTSKRNSDRSNSDYSPSSLNSQQLVSQEFAKENPKK 59

Query: 237 ETAKKVCDYSNIDRESMRRGMESQ---VLGHKTPNIRDLYTFGRKLGQGQFGTTYLCTEV 407
           ET   +   +N D  +MRRG+++Q   VLGHKT NIRDLY+ GRKLGQGQFGTTYLCT++
Sbjct: 60  ETRVSILSPTNKDG-TMRRGVDNQSYYVLGHKTANIRDLYSLGRKLGQGQFGTTYLCTDM 118

Query: 408 STGNEYACKS 437
           +TG EYACKS
Sbjct: 119 ATGIEYACKS 128


>gb|AFR11236.1| calcium dependent protein kinase 6, partial [Chenopodium album]
          Length = 449

 Score =  101 bits (252), Expect = 5e-20
 Identities = 61/146 (41%), Positives = 79/146 (54%), Gaps = 19/146 (13%)
 Frame = +3

Query: 57  MGNTCRGSFGDKYIDD---------GYYNTKPSDXXXXXXXXXXXXXXXXXXXXXXXXXQ 209
           MGNTCRGSFG K+            G  N+  +                          Q
Sbjct: 1   MGNTCRGSFGVKFHQGETQPEDHSVGNSNSNTNSNTTSSNTTKRNDSDYSDYSPNSLRNQ 60

Query: 210 QIIAEELFKETAKKVCDYSNI-------DRESMRRGMESQ---VLGHKTPNIRDLYTFGR 359
           Q++ +E  ++  KK  D++++       D  ++R+  ++Q   VLGHKT NIRDLYT GR
Sbjct: 61  QLVNQEFAQDNPKK--DHNSVVVVPMAKDNNTVRKQSDNQAYYVLGHKTANIRDLYTLGR 118

Query: 360 KLGQGQFGTTYLCTEVSTGNEYACKS 437
           KLGQGQFGTTYLCTE+STG EYACKS
Sbjct: 119 KLGQGQFGTTYLCTEISTGIEYACKS 144


>emb|CAN78387.1| hypothetical protein VITISV_017368 [Vitis vinifera]
          Length = 561

 Score =  101 bits (252), Expect = 5e-20
 Identities = 60/130 (46%), Positives = 72/130 (55%), Gaps = 3/130 (2%)
 Frame = +3

Query: 57  MGNTCRGSFGDKYIDDGYYNTKPSDXXXXXXXXXXXXXXXXXXXXXXXXXQQIIAEELFK 236
           MGNTCRGSF  KY   GY   +                            Q+   E   K
Sbjct: 1   MGNTCRGSFRGKYFQ-GYGQPEEQSTSKRNSDRSNSDYSPSSLNSQQLVSQEFAKENPKK 59

Query: 237 ETAKKVCDYSNIDRESMRRGMESQ---VLGHKTPNIRDLYTFGRKLGQGQFGTTYLCTEV 407
           ET   +   +N D  +MRRG+++Q   VLGHKT NIRDLY+ GRKLGQGQFGTT LCT++
Sbjct: 60  ETRVSILSPTNKDG-TMRRGVDNQSYYVLGHKTANIRDLYSLGRKLGQGQFGTTXLCTDM 118

Query: 408 STGNEYACKS 437
           +TG EYACKS
Sbjct: 119 ATGIEYACKS 128


>ref|XP_002520611.1| calcium-dependent protein kinase, putative [Ricinus communis]
           gi|223540210|gb|EEF41784.1| calcium-dependent protein
           kinase, putative [Ricinus communis]
          Length = 561

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 63/134 (47%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
 Frame = +3

Query: 57  MGNTCRGSFGDKYIDDGYYNTKPSDXXXXXXXXXXXXXXXXXXXXXXXXXQQIIAEELFK 236
           MGNTCRGSF  K +  GY  ++P D                           + A+E  K
Sbjct: 1   MGNTCRGSFKGK-LYQGY--SQPEDQSTASHTNRNPSSNNSNTEHSPT---SVTAQEFAK 54

Query: 237 ETAKKVCDYSNIDRES----MRRGMESQ---VLGHKTPNIRDLYTFGRKLGQGQFGTTYL 395
           +  KK  ++  I        MRRG ++Q   VLGHKT NIRDLYT GRKLGQGQFGTTYL
Sbjct: 55  DNPKKDNNFPLISPNRKDLIMRRGADNQSYYVLGHKTANIRDLYTLGRKLGQGQFGTTYL 114

Query: 396 CTEVSTGNEYACKS 437
           C E STG EYACKS
Sbjct: 115 CVENSTGTEYACKS 128


>gb|AAL68972.1| calmodulin-like-domain protein kinase CPK2 [Cucurbita maxima]
          Length = 558

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 62/132 (46%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
 Frame = +3

Query: 57  MGNTCRGSFGDKYIDDGYYNTKPSDXXXXXXXXXXXXXXXXXXXXXXXXXQQIIAEELFK 236
           MGNTCRGSF    I  GY   + S                           Q  AEE   
Sbjct: 1   MGNTCRGSFKGN-IFQGYSQPEESSTPNFKRNINGSSDHSPSSINTNNLISQAFAEENKT 59

Query: 237 ETAKKVC--DYSNIDRESMRRGMESQ---VLGHKTPNIRDLYTFGRKLGQGQFGTTYLCT 401
           ++    C  DY+      MR+  E+Q   VLGHKT NIRDLYT GRKLGQGQFGTTYLCT
Sbjct: 60  KSKDNDCKKDYT------MRKSAENQAYYVLGHKTANIRDLYTLGRKLGQGQFGTTYLCT 113

Query: 402 EVSTGNEYACKS 437
           E+ TG EYACKS
Sbjct: 114 EIMTGIEYACKS 125


Top