BLASTX nr result

ID: Coptis23_contig00028946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028946
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
 Frame = -3

Query: 318 INTSTMLKFFTPTLTDGVAFV--PQEIIDEGVEVWKDILIGYFLNKRSTFPCVKNFLEKA 145
           I++   L F  PT+TDG   V  P ++ ++G E WK  L+G+F+ ++  +P V +  ++ 
Sbjct: 119 ISSVRNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRI 178

Query: 144 WKLNGHMDI-TTDRDLFFIKFSLAENNNIVLKGGPLFISGKIFVIRPW 4
           W   G  ++ ++D   F   F   ++   VL+  P  ++ +  V++ W
Sbjct: 179 WSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRW 226


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
 Frame = -3

Query: 318 INTSTMLKFFTPTLTDGVAFV--PQEIIDEGVEVWKDILIGYFLNKRSTFPCVKNFLEKA 145
           I++   L F  PT+TDG   V  P ++ ++G E WK  L+G+F+ ++  +P V +  ++ 
Sbjct: 119 ISSVRNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFMGQKLPYPVVNSIAKRI 178

Query: 144 WKLNGHMDI-TTDRDLFFIKFSLAENNNIVLKGGPLFISGKIFVIRPW 4
           W   G +++ ++D   F   F   +    VL+  P  ++    V++ W
Sbjct: 179 WSSYGLLEVLSSDNGFFIFNFDSVDRATNVLERAPWHMANMPLVLKRW 226


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
 Frame = -3

Query: 318 INTSTMLKFFTPTLTDGVAFV--PQEIIDEGVEVWKDILIGYFLNKRSTFPCVKNFLEKA 145
           I++   L F  PT+TDG   V  P ++ ++G E WK  L+G+F+ ++  +P V +  ++ 
Sbjct: 119 ISSVRNLHFAPPTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRI 178

Query: 144 WKLNGHMDI-TTDRDLFFIKFSLAENNNIVLKGGPLFISGKIFVIRPW 4
           W   G  ++ ++D   F   F   ++   VL+  P  ++ +  V++ W
Sbjct: 179 WSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRW 226


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
 Frame = -3

Query: 318 INTSTMLKFFTPTLTDGVAFV--PQEIIDEGVEVWKDILIGYFLNKRSTFPCVKNFLEKA 145
           I++   L F  PT TDG   V  P ++ ++G E WK  L+G+F+ ++  +P V +  ++ 
Sbjct: 119 ISSVRNLHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRI 178

Query: 144 WKLNGHMDI-TTDRDLFFIKFSLAENNNIVLKGGPLFISGKIFVIRPW 4
           W   G  ++ ++D   F   F   ++   VL+  P  ++ +  V++ W
Sbjct: 179 WSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRW 226


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
 Frame = -3

Query: 318 INTSTMLKFFTPTLTDGVAFV--PQEIIDEGVEVWKDILIGYFLNKRSTFPCVKNFLEKA 145
           I++   + F  PT TDG   V  P ++ ++G E WK  L+G+F+ ++  +P V +  ++ 
Sbjct: 119 ISSVRNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRI 178

Query: 144 WKLNGHMDI-TTDRDLFFIKFSLAENNNIVLKGGPLFISGKIFVIRPW 4
           W   G  ++ ++D   F   F   ++   VL+  P  ++ +  V++ W
Sbjct: 179 WSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRW 226



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
 Frame = -3

Query: 318  INTSTMLKFFTPTLTDGVAFV--PQEIIDEGVEVWKDILIGYFLNKRSTFPCVKNFLEKA 145
            I++   + F  PT TDG   V  P ++ ++G E WK  L+G+F+ ++  +P V +  ++ 
Sbjct: 912  ISSVRNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRI 971

Query: 144  WKLNGHMDI-TTDRDLFFIKFSLAENNNIVLKGGPLFISGKIFVIRPW 4
            W   G  ++ ++D   F   F   ++   VL+  P  ++ +  V++ W
Sbjct: 972  WSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRW 1019


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