BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028942
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002525045.1| hypothetical protein RCOM_0882640 [Ricinus c...    62   5e-08
ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...    60   2e-07
emb|CBI36980.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002531983.1| RNA binding protein, putative [Ricinus commu...    60   2e-07

>ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|222844511|gb|EEE82058.1|
           predicted protein [Populus trichocarpa]
          Length = 919

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
 Frame = +2

Query: 5   DAPVNRLTSQSKLPITLREASMHGLEIQKPLCLTKCSSSLKGHSNSGNQCYKAFENGETE 184
           DA  ++  +    P++    +MHG    + L L+       G   SG       E  E +
Sbjct: 658 DAAASKNVADDDQPLSTWFGNMHGSAGLEELRLST------GRIASG-----VSEAREKK 706

Query: 185 TV-MQAFLVDQSSDEVMLENRTFPFTKSYSVWGNVESLEVFRLMPQHPHFRPLQKVNELL 361
            V +Q+  VD  S++ M+EN+  PF K   VW  +ES+EVF+++PQ PHF PL +  E  
Sbjct: 707 VVAVQSCTVDPKSNDTMVENQLVPFVKKSPVWNTIESMEVFQIIPQKPHFHPLTECKEEY 766

Query: 362 REG 370
           REG
Sbjct: 767 REG 769


>ref|XP_002525045.1| hypothetical protein RCOM_0882640 [Ricinus communis]
           gi|223535707|gb|EEF37372.1| hypothetical protein
           RCOM_0882640 [Ricinus communis]
          Length = 148

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/75 (45%), Positives = 44/75 (58%)
 Frame = +2

Query: 146 NQCYKAFENGETETVMQAFLVDQSSDEVMLENRTFPFTKSYSVWGNVESLEVFRLMPQHP 325
           NQ   A E  E ET+ Q+ +V+  ++   +EN   PF KS S+W  +ESL VF  MPQ  
Sbjct: 23  NQLNDAGER-ELETITQSPVVNVQANSEPVENPETPFAKSSSIWEKIESLGVFHFMPQKL 81

Query: 326 HFRPLQKVNELLREG 370
           HF PL K  E+ REG
Sbjct: 82  HFHPLVKCKEVCREG 96


>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
 Frame = +2

Query: 8    APVNRLTSQSKLPITLREASMHGLEIQKPLCLT--------KCSSSLKGHSNSGNQCYKA 163
            AP+  + S++K  + +  + +H +   +PL +            +S      + NQ  +A
Sbjct: 942  APLAEIDSKTK-QVEMAVSGVHSVPDDQPLKMWFEGMHSPGVADNSKLSPGQTVNQWNEA 1000

Query: 164  FENGETETVMQAFLVDQSSDEVMLENRTFPFTKSYSVWGNVESLEVFRLMPQHPHFRPLQ 343
             E      V Q+  +D + + ++  N++ PF KS  +W  +E+LEVF+ MPQ PHFRPL+
Sbjct: 1001 RER--PSEVTQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLE 1058

Query: 344  KVNELLREG 370
               E  REG
Sbjct: 1059 NCKEERREG 1067


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
 Frame = +2

Query: 8    APVNRLTSQSKLPITLREASMHGLEIQKPLCLT--------KCSSSLKGHSNSGNQCYKA 163
            AP+  + S++K  + +  + +H +   +PL +            +S      + NQ  +A
Sbjct: 802  APLAEIDSKTK-QVEMAVSGVHSVPDDQPLKMWFEGMHSPGVADNSKLSPGQTVNQWNEA 860

Query: 164  FENGETETVMQAFLVDQSSDEVMLENRTFPFTKSYSVWGNVESLEVFRLMPQHPHFRPLQ 343
             E      V Q+  +D + + ++  N++ PF KS  +W  +E+LEVF+ MPQ PHFRPL+
Sbjct: 861  RER--PSEVTQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLE 918

Query: 344  KVNELLREG 370
               E  REG
Sbjct: 919  NCKEERREG 927


>ref|XP_002531983.1| RNA binding protein, putative [Ricinus communis]
           gi|223528380|gb|EEF30419.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 591

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/50 (52%), Positives = 36/50 (72%)
 Frame = +2

Query: 221 DEVMLENRTFPFTKSYSVWGNVESLEVFRLMPQHPHFRPLQKVNELLREG 370
           D  +++++  PF KS  VWG++ES+EVFRL+PQ PHF PL +  E  REG
Sbjct: 398 DTELVKSQEMPFHKSSFVWGDIESMEVFRLLPQKPHFSPLIEFEEASREG 447