BLASTX nr result

ID: Coptis23_contig00028920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028920
         (1930 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochon...   580   e-163
ref|XP_003541221.1| PREDICTED: proline dehydrogenase 2, mitochon...   573   e-161
gb|ABK91948.1| proline dehydrogenase [Actinidia deliciosa]            564   e-158
ref|NP_001237288.1| proline dehydrogenase [Glycine max] gi|40457...   562   e-157
dbj|BAB83948.1| CIG1 [Nicotiana tabacum]                              555   e-155

>ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochondrial [Vitis vinifera]
            gi|298204407|emb|CBI16887.3| unnamed protein product
            [Vitis vinifera]
          Length = 500

 Score =  580 bits (1495), Expect = e-163
 Identities = 285/444 (64%), Positives = 361/444 (81%), Gaps = 2/444 (0%)
 Frame = +3

Query: 240  SNTARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFSIWLMRSRLIDTPLCKEII 419
            S+T+ + L D + LFSS+ST +LLRS VNLHLA++E  VD  +W+M+SR+++T + +EI+
Sbjct: 56   SSTSTIDLHDVKGLFSSMSTAKLLRSSVNLHLATLEPMVDVGMWVMKSRVLETAVLREIV 115

Query: 420  LAIAKHSFYEHFCAGENLKEASNTLQKLWDD-GLRGILDYGLEDAIDNPSCDRNLNEFLK 596
            L   +H+FYEHFCAG++++EA  T + +W+  GLRG+L Y LE   DN + DRNL  F++
Sbjct: 116  LGTIRHTFYEHFCAGQDVEEACWTARTIWNSAGLRGMLVYALEHTTDNATSDRNLEGFIR 175

Query: 597  AVDSTKMLPPSSVSYACVKVTAICPISLLKRVSDLLRWEYKDPSFNLPWKLDTLPILSKS 776
             V+  K LPPSSVS+   K+TAIC I LLKRVSDLLRW+++DPSF+LPW+ +  PI + S
Sbjct: 176  TVEGAKRLPPSSVSFVIAKMTAICSIDLLKRVSDLLRWQHRDPSFHLPWRQNCFPIFADS 235

Query: 777  SPFYHTLEKPEALSPQEEHDLQQAYERLIKLSEKCYDLNLPLLVDAEYTSVQPAIDYLTY 956
            SPFYHTLE+P+ L+PQEE DLQ A +RL KL +KC + NLPL VDAEYTSVQPAIDYLTY
Sbjct: 236  SPFYHTLERPDPLTPQEEKDLQLALQRLFKLCQKCVEANLPLSVDAEYTSVQPAIDYLTY 295

Query: 957  SAMMKFNK-YSNPIVFGTVQAYLKDAKERTIQATEAAEKMGITMGLKLVRGAYLSSETQL 1133
            SA +++NK  +NPIV+GT+QAYLKDAKER + A +AA+KMG+ +G KLVRGAY+SSETQL
Sbjct: 296  SAAIQYNKDKNNPIVYGTIQAYLKDAKERLLLAVQAADKMGVPIGFKLVRGAYISSETQL 355

Query: 1134 ASSLGHASPIHGSIQETHACYNECASFMIEKVFTGTGAVVLATHNLESGQVAAGKAQGLG 1313
            ASSLG+ SP+H SI+ETHAC+N CASF++E++  G+GAVVLATHNLESG++ A KA+ LG
Sbjct: 356  ASSLGYDSPVHNSIEETHACFNGCASFLLERIAGGSGAVVLATHNLESGKLLATKARDLG 415

Query: 1314 IGKGNPKLQFAQLKGMAEGLSFGLRNAGFQVSKYLPYGPVEMVMPYLLRRAEENRGLLSA 1493
            I K + K+QFAQL GM+E LSFGLRNAGFQVSKY+ +GPVE VMPYLLRRAEENRGLLS 
Sbjct: 416  ISKEDHKVQFAQLYGMSESLSFGLRNAGFQVSKYMAFGPVEKVMPYLLRRAEENRGLLST 475

Query: 1494 STLDRQLMRKELMRRLKVAVW*GD 1565
            STLDR LMRKEL RR+K AV  GD
Sbjct: 476  STLDRHLMRKELKRRIKAAVLGGD 499


>ref|XP_003541221.1| PREDICTED: proline dehydrogenase 2, mitochondrial-like [Glycine max]
          Length = 495

 Score =  573 bits (1477), Expect = e-161
 Identities = 275/439 (62%), Positives = 355/439 (80%)
 Frame = +3

Query: 240  SNTARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFSIWLMRSRLIDTPLCKEII 419
            + TA L+LDD ERLF+SVSTK+LLRS   LH  ++   VD  +W+M+SR+  + + K+++
Sbjct: 57   AGTAALNLDDAERLFASVSTKRLLRSSAVLHATAVGPMVDLGMWMMKSRVFQSGVLKDLV 116

Query: 420  LAIAKHSFYEHFCAGENLKEASNTLQKLWDDGLRGILDYGLEDAIDNPSCDRNLNEFLKA 599
            +A  K +F+ HFCAGE+   A  +++ L D GLRG+L YG+EDA +N  CDRNLN FL  
Sbjct: 117  MAATKETFFSHFCAGEDAASAGRSIRALNDAGLRGMLGYGVEDAHENDGCDRNLNGFLHT 176

Query: 600  VDSTKMLPPSSVSYACVKVTAICPISLLKRVSDLLRWEYKDPSFNLPWKLDTLPILSKSS 779
            VD +K LPPSSVS+  VK+TAICP++LL+R+SDLLRW+ KDPSF LPWK D+LPI ++SS
Sbjct: 177  VDVSKSLPPSSVSFVIVKITAICPMALLERMSDLLRWQQKDPSFVLPWKQDSLPIFAESS 236

Query: 780  PFYHTLEKPEALSPQEEHDLQQAYERLIKLSEKCYDLNLPLLVDAEYTSVQPAIDYLTYS 959
            P YHT ++PE L+P+EE DLQ A +RL++L +KC + N+PLLVDAE+T+VQPAIDY TYS
Sbjct: 237  PLYHTQKRPEPLTPEEESDLQLANQRLLELCQKCEEANMPLLVDAEHTTVQPAIDYFTYS 296

Query: 960  AMMKFNKYSNPIVFGTVQAYLKDAKERTIQATEAAEKMGITMGLKLVRGAYLSSETQLAS 1139
            + ++ NK  NPIVFGT+Q YLKDAKER +  T+AAEKMG+ MG KLVRGAY+S+E++LA 
Sbjct: 297  SSIRHNKDDNPIVFGTIQTYLKDAKERLLLTTKAAEKMGVPMGFKLVRGAYMSTESKLAE 356

Query: 1140 SLGHASPIHGSIQETHACYNECASFMIEKVFTGTGAVVLATHNLESGQVAAGKAQGLGIG 1319
              G+ASPIH +IQ+TH C+N+C+SF++EK+  G G+VVLATHN+ESG++AA KA  LG+G
Sbjct: 357  FFGYASPIHNTIQDTHNCFNDCSSFLLEKIANGPGSVVLATHNIESGKLAATKAYELGVG 416

Query: 1320 KGNPKLQFAQLKGMAEGLSFGLRNAGFQVSKYLPYGPVEMVMPYLLRRAEENRGLLSAST 1499
            K N KL+FAQL GM+E LSFGL NAGFQVSKY+P+GPV+MVMPYLLRRAEENRGLL+AS 
Sbjct: 417  KVNHKLEFAQLYGMSEALSFGLSNAGFQVSKYMPFGPVDMVMPYLLRRAEENRGLLAASG 476

Query: 1500 LDRQLMRKELMRRLKVAVW 1556
             DRQLMRKEL RRLK AV+
Sbjct: 477  FDRQLMRKELGRRLKAAVF 495


>gb|ABK91948.1| proline dehydrogenase [Actinidia deliciosa]
          Length = 508

 Score =  564 bits (1454), Expect = e-158
 Identities = 279/438 (63%), Positives = 341/438 (77%), Gaps = 1/438 (0%)
 Frame = +3

Query: 246  TARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFSIWLMRSRLIDTPLCKEIILA 425
            T  L+L+  + LFSSV T +LLRS  NLH+A+IE  VD  IW+M S+L+  P+ +E+ + 
Sbjct: 71   TTILNLNAVKELFSSVPTLKLLRSAANLHVAAIEPMVDLGIWVMNSKLMTAPVAREVTVG 130

Query: 426  IAKHSFYEHFCAGENLKEASNTLQKLWDDGLRGILDYGLEDAIDNPSCDRNLNEFLKAVD 605
              KH+FYEHFCAG    EA+ T  KLWD GL+G+L Y LE A DN SCD NL+ FLK V+
Sbjct: 131  AIKHTFYEHFCAGRGPVEAAGTAAKLWDSGLKGMLVYALEHAADNESCDWNLDAFLKTVE 190

Query: 606  STKMLPPSSVSYACVKVTAICPISLLKRVSDLLRWEYKD-PSFNLPWKLDTLPILSKSSP 782
            S K L   SVS   VK+TAICP+ LL+RVSDLLRWEY +  SF LPWKL+TLP+ S SSP
Sbjct: 191  SIKSLATCSVSSTVVKITAICPLRLLRRVSDLLRWEYNNNQSFQLPWKLNTLPVFSDSSP 250

Query: 783  FYHTLEKPEALSPQEEHDLQQAYERLIKLSEKCYDLNLPLLVDAEYTSVQPAIDYLTYSA 962
            FYHT  KP+ L+P+EE DL  A +R++KL +KC ++ +PLLVDAE TSVQP IDY TYSA
Sbjct: 251  FYHTPIKPDPLTPEEESDLHLAQQRMLKLCQKCVEVGVPLLVDAEDTSVQPGIDYFTYSA 310

Query: 963  MMKFNKYSNPIVFGTVQAYLKDAKERTIQATEAAEKMGITMGLKLVRGAYLSSETQLASS 1142
             +  NK  NPI++GT+Q YLKDA+ER   A   AE+MG+++G KLVRGAY+SSE +LA+S
Sbjct: 311  ALMHNKGDNPIIYGTIQTYLKDARERLFLAAREAERMGVSIGFKLVRGAYMSSERELAAS 370

Query: 1143 LGHASPIHGSIQETHACYNECASFMIEKVFTGTGAVVLATHNLESGQVAAGKAQGLGIGK 1322
            LG  SPIH +I +THAC+N+CASFM+EK+  G+GAVVLATHN+ESG  AA KA  LGI K
Sbjct: 371  LGVESPIHNTIHQTHACFNDCASFMLEKIANGSGAVVLATHNIESGNKAAVKATDLGIKK 430

Query: 1323 GNPKLQFAQLKGMAEGLSFGLRNAGFQVSKYLPYGPVEMVMPYLLRRAEENRGLLSASTL 1502
            GN  LQFAQL GMA+ LSFGLRNAGFQVSKY+P+GPVE +MPYLLRRAEENRGLL ASTL
Sbjct: 431  GNENLQFAQLYGMADALSFGLRNAGFQVSKYMPFGPVERIMPYLLRRAEENRGLLCASTL 490

Query: 1503 DRQLMRKELMRRLKVAVW 1556
            DRQL+RKELMRRLKVA++
Sbjct: 491  DRQLLRKELMRRLKVAIF 508


>ref|NP_001237288.1| proline dehydrogenase [Glycine max] gi|40457261|gb|AAR86686.1|
            proline dehydrogenase [Glycine max]
          Length = 497

 Score =  562 bits (1449), Expect = e-157
 Identities = 272/441 (61%), Positives = 353/441 (80%), Gaps = 2/441 (0%)
 Frame = +3

Query: 240  SNTARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFSIWLMRSRLIDTPLCKEII 419
            + TA L+LDD ERLF+SVSTK+LLRS   LH  ++   VD  +W+M+SR+  + + K+++
Sbjct: 57   AGTAALNLDDAERLFASVSTKRLLRSSAVLHATAVGPMVDLGMWMMKSRVFQSGVLKDLV 116

Query: 420  LAIAKHSFYEHFCAGENLKEASNTLQKLWDDGLRGILDYGLEDAIDNPSCDRNLNEFLKA 599
            +A  K +F+ HFCAGE+   A  ++  L + GLRG+L YG+EDA +N  CDRNL  FL  
Sbjct: 117  MAATKETFFSHFCAGEDAAAAGRSISALKEAGLRGMLVYGVEDAHENDGCDRNLKGFLHT 176

Query: 600  VDSTKMLPPSSVSYACVKVTAICPISLLKRVSDLLRWEYKDPSFNLPWKLDTLPILSKSS 779
            VD +K LPPSSVS+  VK+TAICP++LL+R+SDLLRW+ KDPSF LPWK D+LPI ++SS
Sbjct: 177  VDVSKSLPPSSVSFVIVKITAICPMTLLERMSDLLRWQQKDPSFVLPWKQDSLPIFAESS 236

Query: 780  PFYHTLEKPEALSPQEEHDLQQAYERLIKLSEKCYDLNLPLLVDAEYTSVQPAIDYLTYS 959
            P YHT ++PE L+P+EE DLQ A +RL++L ++C + N+PLLVDAE+T+VQPAIDY TYS
Sbjct: 237  PLYHTQKRPEPLTPEEESDLQLANQRLLELCQRCEEANMPLLVDAEHTTVQPAIDYFTYS 296

Query: 960  AMMKFNKYSNPIVFGTVQAYLKDAKERTIQATEAAEKMGITMGLKLVRGAYLSSETQLAS 1139
            + ++ NK  NPIVFGT+Q YLKDAKER +  T+AAEKMG+ +G KLVRGAY+S+E++LA 
Sbjct: 297  SSIRHNKDDNPIVFGTIQTYLKDAKERLLLTTKAAEKMGVPLGFKLVRGAYMSTESKLAE 356

Query: 1140 SLGHASPIHGSIQETHACYNECASFMIEKVFTGTG--AVVLATHNLESGQVAAGKAQGLG 1313
            S G+ASPIH +IQETH C+N C+SF++EK+  G G  +VVLATHN+ESG++AA KA  LG
Sbjct: 357  SFGYASPIHNTIQETHNCFNGCSSFLLEKIANGPGSISVVLATHNIESGKLAAAKAYELG 416

Query: 1314 IGKGNPKLQFAQLKGMAEGLSFGLRNAGFQVSKYLPYGPVEMVMPYLLRRAEENRGLLSA 1493
            +GK N KL+FAQL GM+E LSFGL NAGFQVSKY+P+GPV+MVMPYLLRRAEENRGLL+A
Sbjct: 417  VGKVNHKLEFAQLYGMSEALSFGLSNAGFQVSKYMPFGPVDMVMPYLLRRAEENRGLLAA 476

Query: 1494 STLDRQLMRKELMRRLKVAVW 1556
            S  DRQLMRKEL RRLK A++
Sbjct: 477  SGFDRQLMRKELGRRLKAAMF 497


>dbj|BAB83948.1| CIG1 [Nicotiana tabacum]
          Length = 493

 Score =  555 bits (1429), Expect = e-155
 Identities = 272/441 (61%), Positives = 347/441 (78%)
 Frame = +3

Query: 228  DKQVSNTARLSLDDTERLFSSVSTKQLLRSLVNLHLASIESFVDFSIWLMRSRLIDTPLC 407
            DK+V N      +D + LF+ VST +L+RS + L +A+ E  VD  IW+M S+L+  P+ 
Sbjct: 56   DKKVIN-----FEDVKELFTGVSTLKLIRSTLTLQMAATEPMVDVGIWVMNSKLMHMPIV 110

Query: 408  KEIILAIAKHSFYEHFCAGENLKEASNTLQKLWDDGLRGILDYGLEDAIDNPSCDRNLNE 587
            KE+IL   K +FYEHFCAG++L E   T+ KL D GL+G+LDYG+E A +N SCD+++  
Sbjct: 111  KEVILGFVKGTFYEHFCAGKDLIEVRRTVTKLSDVGLKGMLDYGVEHATENESCDQSMKV 170

Query: 588  FLKAVDSTKMLPPSSVSYACVKVTAICPISLLKRVSDLLRWEYKDPSFNLPWKLDTLPIL 767
            FL+  +STK LP SSVS+  VK+TAIC   LLKR+SDLLRWE+K+PSFNLPWK  +LP+ 
Sbjct: 171  FLQTAESTKSLPSSSVSFVVVKITAICTPKLLKRMSDLLRWEHKNPSFNLPWKQKSLPLF 230

Query: 768  SKSSPFYHTLEKPEALSPQEEHDLQQAYERLIKLSEKCYDLNLPLLVDAEYTSVQPAIDY 947
            S SSPFYHT +KPE L+ +EEHDLQ A+ERL+ + +KC +L++ LL+DAE T++QPAIDY
Sbjct: 231  SDSSPFYHTPQKPEPLTVEEEHDLQLAHERLMTICKKCLELDVDLLIDAEDTAIQPAIDY 290

Query: 948  LTYSAMMKFNKYSNPIVFGTVQAYLKDAKERTIQATEAAEKMGITMGLKLVRGAYLSSET 1127
              YSA +K++K  +P++FGT+QAYLKD+KER + A +AAEKMG+ MG KLVRGAY+SSE 
Sbjct: 291  FAYSAAIKYHKDDDPMIFGTIQAYLKDSKERMVIAKKAAEKMGVPMGFKLVRGAYMSSER 350

Query: 1128 QLASSLGHASPIHGSIQETHACYNECASFMIEKVFTGTGAVVLATHNLESGQVAAGKAQG 1307
            +LAS LG  SPIH SI++TH C+N CA FM++++  G+GAVVLATHN++SG++AA KA  
Sbjct: 351  ELASRLGVQSPIHDSIEQTHDCFNSCAEFMLDEISNGSGAVVLATHNIDSGKLAASKAID 410

Query: 1308 LGIGKGNPKLQFAQLKGMAEGLSFGLRNAGFQVSKYLPYGPVEMVMPYLLRRAEENRGLL 1487
            LGI K + KLQFAQL GMAEGLSFGLRNAGFQVSKYLP+GPVE VMPYL+RRAEENRGLL
Sbjct: 411  LGIRKDSQKLQFAQLYGMAEGLSFGLRNAGFQVSKYLPFGPVEQVMPYLIRRAEENRGLL 470

Query: 1488 SASTLDRQLMRKELMRRLKVA 1550
            S S  DRQLMRKEL RR KVA
Sbjct: 471  STSAFDRQLMRKELTRRFKVA 491


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