BLASTX nr result

ID: Coptis23_contig00028917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028917
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524382.1| conserved hypothetical protein [Ricinus comm...   203   1e-50
gb|ABR29877.1| phosphoenolpyruvate carboxylase [Ricinus communis]     203   1e-50
ref|XP_002312371.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-49
ref|XP_003518830.1| PREDICTED: phosphoenolpyruvate carboxylase 4...   193   1e-47
ref|XP_002893416.1| ATPPC4 [Arabidopsis lyrata subsp. lyrata] gi...   192   3e-47

>ref|XP_002524382.1| conserved hypothetical protein [Ricinus communis]
            gi|223536343|gb|EEF37993.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 986

 Score =  203 bits (516), Expect = 1e-50
 Identities = 95/128 (74%), Positives = 106/128 (82%)
 Frame = +3

Query: 72   WCNLMEEISKFSCNNYRSIVYDNPDFLAYFNEVTPQAELGFLNIGIRPARSKNSTGIGHL 251
            W N+MEEISK SC NYRS VY+NP+FLAYF+E TPQAELGFLNIG RP R K+STGIGHL
Sbjct: 761  WRNVMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELGFLNIGSRPTRRKSSTGIGHL 820

Query: 252  RAIPWVFAWTQTRFVXXXXXXXXXXXXXXCEQGYTEDLQAMYKEWPFFQSTIDLIEMVLG 431
            RAIPWVFAWTQTRFV              CE+G+TEDL+AMYKEWPFFQSTIDLIEMVLG
Sbjct: 821  RAIPWVFAWTQTRFVLPAWLGVGAGLKGACEKGFTEDLKAMYKEWPFFQSTIDLIEMVLG 880

Query: 432  KSDIPISR 455
            K+DIPI++
Sbjct: 881  KADIPIAK 888


>gb|ABR29877.1| phosphoenolpyruvate carboxylase [Ricinus communis]
          Length = 1052

 Score =  203 bits (516), Expect = 1e-50
 Identities = 95/128 (74%), Positives = 106/128 (82%)
 Frame = +3

Query: 72   WCNLMEEISKFSCNNYRSIVYDNPDFLAYFNEVTPQAELGFLNIGIRPARSKNSTGIGHL 251
            W N+MEEISK SC NYRS VY+NP+FLAYF+E TPQAELGFLNIG RP R K+STGIGHL
Sbjct: 827  WRNVMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELGFLNIGSRPTRRKSSTGIGHL 886

Query: 252  RAIPWVFAWTQTRFVXXXXXXXXXXXXXXCEQGYTEDLQAMYKEWPFFQSTIDLIEMVLG 431
            RAIPWVFAWTQTRFV              CE+G+TEDL+AMYKEWPFFQSTIDLIEMVLG
Sbjct: 887  RAIPWVFAWTQTRFVLPAWLGVGAGLKGACEKGFTEDLKAMYKEWPFFQSTIDLIEMVLG 946

Query: 432  KSDIPISR 455
            K+DIPI++
Sbjct: 947  KADIPIAK 954


>ref|XP_002312371.1| predicted protein [Populus trichocarpa] gi|222852191|gb|EEE89738.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score =  199 bits (506), Expect = 2e-49
 Identities = 92/128 (71%), Positives = 106/128 (82%)
 Frame = +3

Query: 72  WCNLMEEISKFSCNNYRSIVYDNPDFLAYFNEVTPQAELGFLNIGIRPARSKNSTGIGHL 251
           W NLM+EISK SC +YRS VY+NP+FLAYF+E TPQAELGFLNIG RP R K+STGIGHL
Sbjct: 240 WRNLMDEISKISCQSYRSTVYENPEFLAYFHEATPQAELGFLNIGSRPTRRKSSTGIGHL 299

Query: 252 RAIPWVFAWTQTRFVXXXXXXXXXXXXXXCEQGYTEDLQAMYKEWPFFQSTIDLIEMVLG 431
           RAIPWVFAWTQTRFV              CE+G+T+DL+AMYKEWPFFQSTIDLIEMVLG
Sbjct: 300 RAIPWVFAWTQTRFVLPAWLGVGAGLKGVCEKGHTQDLKAMYKEWPFFQSTIDLIEMVLG 359

Query: 432 KSDIPISR 455
           K+D+PI++
Sbjct: 360 KADVPIAK 367


>ref|XP_003518830.1| PREDICTED: phosphoenolpyruvate carboxylase 4-like [Glycine max]
          Length = 1055

 Score =  193 bits (490), Expect = 1e-47
 Identities = 89/128 (69%), Positives = 104/128 (81%)
 Frame = +3

Query: 72   WCNLMEEISKFSCNNYRSIVYDNPDFLAYFNEVTPQAELGFLNIGIRPARSKNSTGIGHL 251
            W NLME+ISK SC  YR++VY+NP+FL+YF E TPQ+ELGFLNIG RP R K+STGIGHL
Sbjct: 830  WRNLMEDISKISCQCYRNVVYENPEFLSYFQEATPQSELGFLNIGSRPTRRKSSTGIGHL 889

Query: 252  RAIPWVFAWTQTRFVXXXXXXXXXXXXXXCEQGYTEDLQAMYKEWPFFQSTIDLIEMVLG 431
            RAIPWVFAWTQTRFV              CE+G TE+L+AMY+EWPFFQSTIDLIEMVLG
Sbjct: 890  RAIPWVFAWTQTRFVLPAWLGVGAGLKDACEKGQTEELKAMYREWPFFQSTIDLIEMVLG 949

Query: 432  KSDIPISR 455
            K+DIPI++
Sbjct: 950  KADIPIAK 957


>ref|XP_002893416.1| ATPPC4 [Arabidopsis lyrata subsp. lyrata] gi|297339258|gb|EFH69675.1|
            ATPPC4 [Arabidopsis lyrata subsp. lyrata]
          Length = 1061

 Score =  192 bits (487), Expect = 3e-47
 Identities = 89/128 (69%), Positives = 102/128 (79%)
 Frame = +3

Query: 72   WCNLMEEISKFSCNNYRSIVYDNPDFLAYFNEVTPQAELGFLNIGIRPARSKNSTGIGHL 251
            W +LME+IS  SC NYRS VY+NP+FL+YF E TPQAELGFLNIG RP R K+S+GIGHL
Sbjct: 836  WRSLMEDISNISCQNYRSTVYENPEFLSYFQEATPQAELGFLNIGSRPTRRKSSSGIGHL 895

Query: 252  RAIPWVFAWTQTRFVXXXXXXXXXXXXXXCEQGYTEDLQAMYKEWPFFQSTIDLIEMVLG 431
            RAIPWVFAWTQTRFV              CE+G+ +DLQAMYKEWPFFQSTIDLIEMVL 
Sbjct: 896  RAIPWVFAWTQTRFVLPAWLGVGAGLKGVCEKGHADDLQAMYKEWPFFQSTIDLIEMVLA 955

Query: 432  KSDIPISR 455
            K+DIPI++
Sbjct: 956  KADIPIAK 963


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