BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028904
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAI67988.1| hypothetical protein [Oryza sativa Indica Group]...    58   9e-07
ref|YP_002000555.1| orf258 [Oryza sativa Japonica Group] gi|2349...    58   9e-07
ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group] g...    55   5e-06
gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indi...    55   5e-06

>dbj|BAI67988.1| hypothetical protein [Oryza sativa Indica Group]
           gi|374277648|gb|AEZ03754.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|374277660|gb|AEZ03765.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
          Length = 317

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
 Frame = +2

Query: 29  VADLFLEDRTGWDEAKLQDFFHPFLVARIKDIMIRPLGLGKDRLKWGGEKSGRLTVKSVH 208
           VADL L++   WD  K+Q  F P   A I + M RP     D   W  +++G  TV+S +
Sbjct: 15  VADLMLQNTNQWDVEKVQRIFFPLDAAAILN-MPRPRTEQDDFWAWAWDRTGIFTVRSAY 73

Query: 209 RYLAKDRGEGQ----SSSFNTKTVKLLWKTKIPANIQMFKWKAYMKALPMGDRL 358
           R L +  G  +    SS+ +  T K LW+ +I   I++F W+     LP    L
Sbjct: 74  RELIQRCGLSEPATGSSTGDEATWKALWRLRIMPKIRVFWWRVVKNLLPCAAEL 127


>ref|YP_002000555.1| orf258 [Oryza sativa Japonica Group] gi|23495378|dbj|BAC19859.1|
           orf258 [Oryza sativa Japonica Group]
          Length = 258

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
 Frame = +2

Query: 29  VADLFLEDRTGWDEAKLQDFFHPFLVARIKDIMIRPLGLGKDRLKWGGEKSGRLTVKSVH 208
           VADL L++   WD  K+Q  F P   A I + M RP     D   W  +++G  TV+S +
Sbjct: 15  VADLMLQNTNQWDVEKVQRIFFPLDAAAILN-MPRPRTEQDDFWAWAWDRTGIFTVRSAY 73

Query: 209 RYLAKDRGEGQ----SSSFNTKTVKLLWKTKIPANIQMFKWKAYMKALPMGDRL 358
           R L +  G  +    SS+ +  T K LW+ +I   I++F W+     LP    L
Sbjct: 74  RELIQRCGLSEPATGSSTGDEATWKALWRLRIMPKIRVFWWRVVKNLLPCAAEL 127


>ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group] gi|77548275|gb|ABA91072.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group] gi|255679693|dbj|BAH95030.1|
            Os11g0106066 [Oryza sativa Japonica Group]
          Length = 1690

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
 Frame = +2

Query: 29   VADLFLEDRTGWDEAKLQDFFHPFLVARIKDIMIRPLGLGKDRLKWGGEKSGRLTVKSVH 208
            V+DL  +D T WD A+++  F       I  I + P    +D L W  +KSGR +V+S +
Sbjct: 1448 VSDLIGQDGT-WDVAQIRRCFLNIDTELILSICLSPRQ-EEDFLAWHPDKSGRFSVRSAY 1505

Query: 209  RYLAK-DRGEGQSSSF---NTKTVKLLWKTKIPANIQMFKWKAYMKALPMGDRLASWKM 373
                +    EG SSSF   + K+  L+WK K+P  I++F WK     L   D     K+
Sbjct: 1506 NLACRLANTEGSSSSFALHSRKSWDLIWKCKLPQKIKIFAWKVASNCLATMDNKRKRKL 1564


>gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indica Group]
          Length = 961

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
 Frame = +2

Query: 29   VADLFLEDRTGWDEAKLQDFFHPFLVARIKDIMIRPLGLGKDRLKWGGEKSGRLTVKSVH 208
            V+DL L DR  W+E  +++ F+P     I  I + P   G+D + W  +KSG  TV+S +
Sbjct: 700  VSDLLLPDRQQWNEELVRNMFYPPDAEGILRIQL-PHSPGEDIVAWHYDKSGIFTVRSAY 758

Query: 209  RYL------AKDRGEGQSSSFNTKTV-KLLWKTKIPANIQMFKWK 322
            +        + + GE  S+    +T+ K +W T++P  +++F W+
Sbjct: 759  KVALDALLRSDNTGESSSAPNGERTLWKNIWNTQVPQKVRIFAWR 803