BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028900
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   244   2e-62
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   244   2e-62
ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   244   2e-62
ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   242   6e-62
gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1...   239   5e-61

>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  244 bits (623), Expect = 2e-62
 Identities = 115/238 (48%), Positives = 169/238 (71%), Gaps = 3/238 (1%)
 Frame = +2

Query: 2   VAALIVDDGFEHNRGRDVIVNRVGQGLQRIHQLQPSFMALQYPLLFPHGQDGYSMTI--E 175
           +A LIV D  E N  RD+++     GLQRI +  P FMA+QYPLLFP+ +DG+ + I   
Sbjct: 214 IAGLIVGDFGESNGRRDIVIEHKTDGLQRIKEYHPKFMAMQYPLLFPYAEDGFHLDIYYS 273

Query: 176 RNQVPGTRTSKRKRISMREFYAFRIQQRENEGHTVILSDRLFKQYLVDLYACTEEDRFSY 355
           +N     +  KRK++++RE+YA+RIQQR  E +T+I+  RLF+QY+VD +   EE+R  +
Sbjct: 274 QNHAKRKKKKKRKKVTLREYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEEERLRW 333

Query: 356 IRSNQSKLRSELFQNLKDVVIARDTTPASVGKRVVLPSTFTGGPRYMVQNYQDALTICRF 535
           +R NQ+ LR++L++N+ D V+  DT  A+ GKR+VLPS+FTGGPRYMVQNYQDA+ ICR 
Sbjct: 334 VRQNQTVLRTDLYRNVCDAVVRGDTIAAATGKRIVLPSSFTGGPRYMVQNYQDAMAICRT 393

Query: 536 IGSPDLFITFTGNQKWPKIEEFTKK-TGQKAENRDEIVARDFKIKLDELIDDLCKRKH 706
            G+PD+F+TFT N KWP+I+   +K  GQ  ++R +I  R FK+KLD+L+  + + ++
Sbjct: 394 FGNPDIFMTFTANPKWPEIQYMLQKIPGQSVDDRPDIKTRVFKMKLDQLMKHIVEGQY 451


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  244 bits (622), Expect = 2e-62
 Identities = 115/238 (48%), Positives = 168/238 (70%), Gaps = 3/238 (1%)
 Frame = +2

Query: 2   VAALIVDDGFEHNRGRDVIVNRVGQGLQRIHQLQPSFMALQYPLLFPHGQDGYSMTI--E 175
           +  LIV D  E N  RD+++     GLQRI +  P FMA+QYPLLFP+ +DG+ + I   
Sbjct: 214 IVGLIVGDFGESNGRRDIVIEHKTDGLQRIKEYHPKFMAMQYPLLFPYAEDGFHLDIYYS 273

Query: 176 RNQVPGTRTSKRKRISMREFYAFRIQQRENEGHTVILSDRLFKQYLVDLYACTEEDRFSY 355
           +N     +  KRK+++MRE+YA+RIQQR  E +T+I+  RLF+QY+VD +   EE+R  +
Sbjct: 274 QNHAKRKKKKKRKKVTMREYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEEERLRW 333

Query: 356 IRSNQSKLRSELFQNLKDVVIARDTTPASVGKRVVLPSTFTGGPRYMVQNYQDALTICRF 535
           +R NQ+ LR++L++N+ D V+  DT  A+ GKR+VLPS+FTGGPRYMVQNYQDA+ ICR 
Sbjct: 334 VRQNQTVLRTDLYRNVCDAVVRGDTIAAATGKRIVLPSSFTGGPRYMVQNYQDAMAICRT 393

Query: 536 IGSPDLFITFTGNQKWPKIEEFTKK-TGQKAENRDEIVARDFKIKLDELIDDLCKRKH 706
            G+PD+F+TFT N KWP+I+   +K  GQ  ++R +I  R FK+KLD+L+  + + ++
Sbjct: 394 FGNPDIFMTFTANPKWPEIQYMLQKIPGQSVDDRPDIKTRVFKMKLDQLMKHIVEGQY 451


>ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510129|gb|AES91271.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1531

 Score =  244 bits (622), Expect = 2e-62
 Identities = 115/238 (48%), Positives = 168/238 (70%), Gaps = 3/238 (1%)
 Frame = +2

Query: 2   VAALIVDDGFEHNRGRDVIVNRVGQGLQRIHQLQPSFMALQYPLLFPHGQDGYSMTI--E 175
           +  LIV D  E N  RD+++     GLQRI +  P FMA+QYPLLFP+ +DG+ + I   
Sbjct: 187 IVGLIVGDFGESNGRRDIVIEHKTDGLQRIKEYHPKFMAMQYPLLFPYAEDGFHLDIYYS 246

Query: 176 RNQVPGTRTSKRKRISMREFYAFRIQQRENEGHTVILSDRLFKQYLVDLYACTEEDRFSY 355
           +N     +  KRK+++MRE+YA+RIQQR  E +T+I+  RLF+QY+VD +   EE+R  +
Sbjct: 247 QNHAKRKKKKKRKKVTMREYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEEERLRW 306

Query: 356 IRSNQSKLRSELFQNLKDVVIARDTTPASVGKRVVLPSTFTGGPRYMVQNYQDALTICRF 535
           +R NQ+ LR++L++N+ D V+  DT  A+ GKR+VLPS+FTGGPRYMVQNYQDA+ ICR 
Sbjct: 307 VRQNQTVLRTDLYRNVCDAVVRGDTIAAATGKRIVLPSSFTGGPRYMVQNYQDAMAICRT 366

Query: 536 IGSPDLFITFTGNQKWPKIEEFTKK-TGQKAENRDEIVARDFKIKLDELIDDLCKRKH 706
            G+PD+F+TFT N KWP+I+   +K  GQ  ++R +I  R FK+KLD+L+  + + ++
Sbjct: 367 FGNPDIFMTFTANPKWPEIQYMLQKIPGQSVDDRPDIKTRVFKMKLDQLMKHIVEGQY 424


>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1427

 Score =  242 bits (618), Expect = 6e-62
 Identities = 115/238 (48%), Positives = 168/238 (70%), Gaps = 3/238 (1%)
 Frame = +2

Query: 2   VAALIVDDGFEHNRGRDVIVNRVGQGLQRIHQLQPSFMALQYPLLFPHGQDGYSMTI--E 175
           +A LIV D  E N  RD+++     GLQRI +  P FMA+QYPLLFP+ +DG+ + I   
Sbjct: 214 IAGLIVGDFGESNGRRDIVIEHKTDGLQRIKEYHPKFMAMQYPLLFPYAEDGFHLDIYYS 273

Query: 176 RNQVPGTRTSKRKRISMREFYAFRIQQRENEGHTVILSDRLFKQYLVDLYACTEEDRFSY 355
           +N     +  KRK+++MRE+YA+RIQQR  E +T+I+  RLF+QY+VD +   EE+R  +
Sbjct: 274 QNHAKRKKKKKRKKVTMREYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEEERLRW 333

Query: 356 IRSNQSKLRSELFQNLKDVVIARDTTPASVGKRVVLPSTFTGGPRYMVQNYQDALTICRF 535
           +R NQ+ LR++L++N+ D V+  DT  A+ GKR+VLPS+FTGG RYMVQNYQDA+ ICR 
Sbjct: 334 VRQNQTVLRTDLYRNVCDAVVRGDTIAAATGKRIVLPSSFTGGSRYMVQNYQDAMAICRT 393

Query: 536 IGSPDLFITFTGNQKWPKIEEFTKK-TGQKAENRDEIVARDFKIKLDELIDDLCKRKH 706
            G+PD+F+TFT N KWP+I+   +K  GQ  ++R +I  R FK+KLD+L+  + + ++
Sbjct: 394 FGNPDIFMTFTANPKWPEIQYMLQKIPGQSVDDRPDIKTRVFKMKLDQLMKHIVEGQY 451


>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein [Beta
            vulgaris subsp. vulgaris]
          Length = 2037

 Score =  239 bits (610), Expect = 5e-61
 Identities = 119/234 (50%), Positives = 163/234 (69%)
 Frame = +2

Query: 2    VAALIVDDGFEHNRGRDVIVNRVGQGLQRIHQLQPSFMALQYPLLFPHGQDGYSMTIERN 181
            VAALI+ D       RD++    G  LQRI +L PS++ALQYPLLFP+G+D Y + I+ +
Sbjct: 944  VAALIIGDIDNFANNRDIVAETRGGALQRISELHPSYLALQYPLLFPYGEDSYRIDIKLS 1003

Query: 182  QVPGTRTSKRKRISMREFYAFRIQQRENEGHTVILSDRLFKQYLVDLYACTEEDRFSYIR 361
                 R   R R+SMREF+A+ I+ R NE  T++ S +LF+Q++VD Y   E +R SYIR
Sbjct: 1004 NTG--RNGGRSRVSMREFFAYWIRDRLNEVGTLLRSRKLFQQFIVDAYTMIESERLSYIR 1061

Query: 362  SNQSKLRSELFQNLKDVVIARDTTPASVGKRVVLPSTFTGGPRYMVQNYQDALTICRFIG 541
            +NQ  LRSE+++N+ +     +T  +SVGKR++LPS+FTGG RYMVQNY DA+ +C++ G
Sbjct: 1062 ANQKNLRSEIYKNVCEAAQLGNTDASSVGKRIILPSSFTGGARYMVQNYLDAMALCKWYG 1121

Query: 542  SPDLFITFTGNQKWPKIEEFTKKTGQKAENRDEIVARDFKIKLDELIDDLCKRK 703
             PDLFITFT N KWP+I  F  + G KAE+R +I+ R FKIKLD+LI DL + K
Sbjct: 1122 YPDLFITFTCNAKWPEITRFVNQQGLKAEDRPDIICRVFKIKLDQLIKDLREEK 1175