BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028886
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513878.1| gtpase mss1/trme, putative [Ricinus communis...    70   9e-15
ref|NP_001149416.1| LOC100283042 [Zea mays] gi|195627080|gb|ACG3...    70   9e-15
gb|AFW62152.1| tRNA modification GTPase trmE [Zea mays]                70   9e-15
ref|XP_003522812.1| PREDICTED: tRNA modification GTPase MnmE-lik...    68   2e-14
ref|XP_002444316.1| hypothetical protein SORBIDRAFT_07g020060 [S...    71   2e-14

>ref|XP_002513878.1| gtpase mss1/trme, putative [Ricinus communis]
           gi|223546964|gb|EEF48461.1| gtpase mss1/trme, putative
           [Ricinus communis]
          Length = 557

 Score = 70.5 bits (171), Expect(2) = 9e-15
 Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
 Frame = +2

Query: 92  APSESVETLKR---VVNKHVLTCAVNGQCIPDVESALVEIAGLDRIPAGGRRWAVNKRQF 262
           APS S+E + R     +KHV TCAV GQ I ++E A+ EI GL+RIP GGR+W VN+RQ 
Sbjct: 437 APSLSMEWIGRYSKAFSKHVFTCAVTGQGIKELEMAISEIVGLNRIPTGGRKWTVNQRQC 496

Query: 263 EQL 271
           EQL
Sbjct: 497 EQL 499



 Score = 34.3 bits (77), Expect(2) = 9e-15
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = +1

Query: 1   AELLERIEVNQEITGSSALTILVINKIDCTCSI 99
           +ELL RIE N++  GSS   +L INKID   S+
Sbjct: 408 SELLSRIESNKKSVGSSTPVVLAINKIDTAPSL 440


>ref|NP_001149416.1| LOC100283042 [Zea mays] gi|195627080|gb|ACG35370.1| tRNA
           modification GTPase trmE [Zea mays]
          Length = 546

 Score = 70.5 bits (171), Expect(2) = 9e-15
 Identities = 30/59 (50%), Positives = 42/59 (71%)
 Frame = +2

Query: 95  PSESVETLKRVVNKHVLTCAVNGQCIPDVESALVEIAGLDRIPAGGRRWAVNKRQFEQL 271
           P E  +    +  KHV TCAV G+ I D+ESA++E+ G++ +P+ GRRW VN+RQFEQL
Sbjct: 430 PGEQFKQFSGLFRKHVQTCAVTGKGISDLESAVIEVRGIEHVPSEGRRWTVNQRQFEQL 488



 Score = 34.3 bits (77), Expect(2) = 9e-15
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 4   ELLERIEVNQEITGSSALTILVINKIDC 87
           +L+E + VN++ +GS+   +LVINK+DC
Sbjct: 398 KLMEHVSVNRKSSGSAVPMVLVINKVDC 425


>gb|AFW62152.1| tRNA modification GTPase trmE [Zea mays]
          Length = 545

 Score = 70.5 bits (171), Expect(2) = 9e-15
 Identities = 30/59 (50%), Positives = 42/59 (71%)
 Frame = +2

Query: 95  PSESVETLKRVVNKHVLTCAVNGQCIPDVESALVEIAGLDRIPAGGRRWAVNKRQFEQL 271
           P E  +    +  KHV TCAV G+ I D+ESA++E+ G++ +P+ GRRW VN+RQFEQL
Sbjct: 429 PGEQFKQFSGLFRKHVQTCAVTGKGISDLESAVIEVRGIEHVPSEGRRWTVNQRQFEQL 487



 Score = 34.3 bits (77), Expect(2) = 9e-15
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 4   ELLERIEVNQEITGSSALTILVINKIDC 87
           +L+E + VN++ +GS+   +LVINK+DC
Sbjct: 397 KLMEHVSVNRKSSGSAVPMVLVINKVDC 424


>ref|XP_003522812.1| PREDICTED: tRNA modification GTPase MnmE-like [Glycine max]
          Length = 520

 Score = 68.2 bits (165), Expect(2) = 2e-14
 Identities = 30/49 (61%), Positives = 39/49 (79%)
 Frame = +2

Query: 125 VVNKHVLTCAVNGQCIPDVESALVEIAGLDRIPAGGRRWAVNKRQFEQL 271
           + +KHV TCAV GQ + D+E A+++I GL+ IPAGGRRW VN+RQ EQL
Sbjct: 414 IFSKHVFTCAVTGQGLHDLEGAVLQIVGLEGIPAGGRRWTVNQRQCEQL 462



 Score = 35.8 bits (81), Expect(2) = 2e-14
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +1

Query: 4   ELLERIEVNQEITGSSALTILVINKIDC 87
           +LLERI+  +  TGSS   ILV+NKIDC
Sbjct: 371 KLLERIQSTKGSTGSSTPVILVVNKIDC 398


>ref|XP_002444316.1| hypothetical protein SORBIDRAFT_07g020060 [Sorghum bicolor]
           gi|241940666|gb|EES13811.1| hypothetical protein
           SORBIDRAFT_07g020060 [Sorghum bicolor]
          Length = 548

 Score = 70.9 bits (172), Expect(2) = 2e-14
 Identities = 31/59 (52%), Positives = 42/59 (71%)
 Frame = +2

Query: 95  PSESVETLKRVVNKHVLTCAVNGQCIPDVESALVEIAGLDRIPAGGRRWAVNKRQFEQL 271
           P E  E    +  KHV TCAV G+ I D+ESA++E+ G++ +P+ GRRW VN+RQFEQL
Sbjct: 432 PGEQFEQFSGLFIKHVQTCAVTGKGISDLESAVIEVRGIEHVPSEGRRWTVNQRQFEQL 490



 Score = 32.7 bits (73), Expect(2) = 2e-14
 Identities = 12/28 (42%), Positives = 22/28 (78%)
 Frame = +1

Query: 4   ELLERIEVNQEITGSSALTILVINKIDC 87
           +L+E + +N++ +GS+   +LVINK+DC
Sbjct: 400 KLMEHVLINRKSSGSAVPMVLVINKVDC 427