BLASTX nr result

ID: Coptis23_contig00028879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028879
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    63   3e-08
emb|CBI30968.3| unnamed protein product [Vitis vinifera]               63   3e-08
emb|CAN67096.1| hypothetical protein VITISV_016807 [Vitis vinifera]    55   7e-06

>ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Vitis
           vinifera]
          Length = 1044

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
 Frame = +1

Query: 1   ESQAHQAEVVIHHGVNTNPLWK--GLSNKWVLCSSGLTIGEKETVTKFTKMAGISLLKTY 174
           +S   +A+V + H ++T+  W   G   K VLC S LT+ EK+ V++F +++G+++LK +
Sbjct: 792 QSDIQRAQVAVKHDISTSQRWNSHGSPGKLVLCCSALTVAEKDIVSEFERLSGVTVLKKW 851

Query: 175 GPSVTHII 198
           GP +TH+I
Sbjct: 852 GPGITHVI 859


>emb|CBI30968.3| unnamed protein product [Vitis vinifera]
          Length = 1434

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
 Frame = +1

Query: 1    ESQAHQAEVVIHHGVNTNPLWK--GLSNKWVLCSSGLTIGEKETVTKFTKMAGISLLKTY 174
            +S   +A+V + H ++T+  W   G   K VLC S LT+ EK+ V++F +++G+++LK +
Sbjct: 1161 QSDIQRAQVAVKHDISTSQRWNSHGSPGKLVLCCSALTVAEKDIVSEFERLSGVTVLKKW 1220

Query: 175  GPSVTHII 198
            GP +TH+I
Sbjct: 1221 GPGITHVI 1228


>emb|CAN67096.1| hypothetical protein VITISV_016807 [Vitis vinifera]
          Length = 952

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
 Frame = +1

Query: 1   ESQAHQAEVVIHHGVNTNPLWK--GLSNKWVLCSSGLTIGEKETVTKFTKMAGISLLKTY 174
           +S   +A+V + H ++T+  W   G   K VLC S LT+ EK+ V++F +++G+++LK +
Sbjct: 735 QSDIQRAQVAVKHDISTSQRWNSHGSPGKLVLCCSALTVAEKDIVSEFERLSGVTVLKKW 794

Query: 175 GPSV 186
           GP +
Sbjct: 795 GPGI 798


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