BLASTX nr result

ID: Coptis23_contig00028876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028876
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267360.1| PREDICTED: uncharacterized protein LOC100240...    91   1e-16
ref|XP_002876695.1| hypothetical protein ARALYDRAFT_486797 [Arab...    89   3e-16
emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]    89   5e-16
gb|AFK43353.1| unknown [Lotus japonicus]                               88   6e-16
ref|NP_191851.1| uncharacterized protein [Arabidopsis thaliana] ...    87   2e-15

>ref|XP_002267360.1| PREDICTED: uncharacterized protein LOC100240880 [Vitis vinifera]
           gi|296086621|emb|CBI32256.3| unnamed protein product
           [Vitis vinifera]
          Length = 82

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/62 (64%), Positives = 54/62 (87%)
 Frame = -1

Query: 288 RQLEQEVETVIKVLQPGPLGIIEHKYSAEEVHEAKATVDRAVKNWKRNAAVDKTGAVMED 109
           RQLEQE+ETV+KVLQPGPLGIIEHK+S EE+ EA+ATV+RAV NW+RNA +++   +++ 
Sbjct: 19  RQLEQEIETVVKVLQPGPLGIIEHKFSTEEIREAEATVNRAVANWRRNANLEQGSDILKS 78

Query: 108 HI 103
           +I
Sbjct: 79  YI 80


>ref|XP_002876695.1| hypothetical protein ARALYDRAFT_486797 [Arabidopsis lyrata subsp.
           lyrata] gi|297322533|gb|EFH52954.1| hypothetical protein
           ARALYDRAFT_486797 [Arabidopsis lyrata subsp. lyrata]
          Length = 80

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/62 (64%), Positives = 52/62 (83%)
 Frame = -1

Query: 288 RQLEQEVETVIKVLQPGPLGIIEHKYSAEEVHEAKATVDRAVKNWKRNAAVDKTGAVMED 109
           RQLEQE ETVI VLQPGPLGIIEHK+SA+E+ EAKATV RAV NW+R++ V+    +++D
Sbjct: 17  RQLEQEAETVINVLQPGPLGIIEHKFSAQEIREAKATVSRAVDNWRRHSEVEHANGLLKD 76

Query: 108 HI 103
           ++
Sbjct: 77  YL 78


>emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]
          Length = 1388

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 39/61 (63%), Positives = 53/61 (86%)
 Frame = -1

Query: 285  QLEQEVETVIKVLQPGPLGIIEHKYSAEEVHEAKATVDRAVKNWKRNAAVDKTGAVMEDH 106
            QLEQE+ETV+KVLQPGPLGIIEHK+S EE+ EA+ATV+RAV NW+RNA +++   +++ +
Sbjct: 1326 QLEQEIETVVKVLQPGPLGIIEHKFSTEEIREAEATVNRAVANWRRNANLEQGSDILKSY 1385

Query: 105  I 103
            I
Sbjct: 1386 I 1386


>gb|AFK43353.1| unknown [Lotus japonicus]
          Length = 82

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 38/62 (61%), Positives = 53/62 (85%)
 Frame = -1

Query: 288 RQLEQEVETVIKVLQPGPLGIIEHKYSAEEVHEAKATVDRAVKNWKRNAAVDKTGAVMED 109
           R+LEQE+ETV+KVLQPGPLGIIEHK+S+EE+H+A ATV +AV NW+RNA ++    +++ 
Sbjct: 19  RKLEQEMETVVKVLQPGPLGIIEHKFSSEEIHKANATVSKAVANWRRNATLEDKSHILKG 78

Query: 108 HI 103
           +I
Sbjct: 79  YI 80


>ref|NP_191851.1| uncharacterized protein [Arabidopsis thaliana]
           gi|7573421|emb|CAB87737.1| putative protein [Arabidopsis
           thaliana] gi|332646890|gb|AEE80411.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 80

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/62 (62%), Positives = 52/62 (83%)
 Frame = -1

Query: 288 RQLEQEVETVIKVLQPGPLGIIEHKYSAEEVHEAKATVDRAVKNWKRNAAVDKTGAVMED 109
           RQLE+E ETVI VLQPGPLGIIEHK+SA+E+ EAKATV RAV +W+R++ V+    +++D
Sbjct: 17  RQLEKEAETVINVLQPGPLGIIEHKFSAQEIREAKATVSRAVDSWRRHSEVEHANGLLKD 76

Query: 108 HI 103
           +I
Sbjct: 77  YI 78


Top