BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028874
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...   183   1e-44
ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom...   182   2e-44
ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis...   182   2e-44
ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2...   181   5e-44
ref|NP_189031.1| DNA topoisomerase 2 [Arabidopsis thaliana] gi|1...   179   3e-43

>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
            DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score =  183 bits (464), Expect = 1e-44
 Identities = 85/121 (70%), Positives = 98/121 (80%)
 Frame = +2

Query: 2    TKLSGITRFLFHKXXXXXXXXXXXXGQPIEPVWYMPIIPLVLVNGSEGIGTGWSTYIPNY 181
            T+LS I RFLF K            GQ IEP WY+PI+P+VL+NGSEGIGTGWS+Y+PNY
Sbjct: 787  TRLSPIARFLFPKEDDTIHDYLNEDGQYIEPTWYVPIVPMVLINGSEGIGTGWSSYVPNY 846

Query: 182  NPRDIVANIRRLLNGEAMEAMDPWYRGFMGTIEKTATKESGVTYTVSGIIEEVNSTTLRI 361
            NPRD+VAN+RRLLN E ME MDPWY+GF GTIEKTATKE+G TYTV+GIIEEVN TTLRI
Sbjct: 847  NPRDLVANVRRLLNDEPMEPMDPWYKGFKGTIEKTATKEAGATYTVTGIIEEVNETTLRI 906

Query: 362  T 364
            +
Sbjct: 907  S 907


>ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis
            sativus]
          Length = 1460

 Score =  182 bits (462), Expect = 2e-44
 Identities = 86/120 (71%), Positives = 94/120 (78%)
 Frame = +2

Query: 2    TKLSGITRFLFHKXXXXXXXXXXXXGQPIEPVWYMPIIPLVLVNGSEGIGTGWSTYIPNY 181
            TKLS +TRFLF +            GQ IEP WYMPIIP VLVNGSEGIGTGWS+Y+PNY
Sbjct: 755  TKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSEGIGTGWSSYVPNY 814

Query: 182  NPRDIVANIRRLLNGEAMEAMDPWYRGFMGTIEKTATKESGVTYTVSGIIEEVNSTTLRI 361
            NPRDI+ N+RR+L GE M  MDPWYRGF GTIEKTATKE G TYTVSGIIEEV+ TTLRI
Sbjct: 815  NPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTVSGIIEEVSDTTLRI 874


>ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis sativus]
          Length = 1459

 Score =  182 bits (462), Expect = 2e-44
 Identities = 86/120 (71%), Positives = 94/120 (78%)
 Frame = +2

Query: 2    TKLSGITRFLFHKXXXXXXXXXXXXGQPIEPVWYMPIIPLVLVNGSEGIGTGWSTYIPNY 181
            TKLS +TRFLF +            GQ IEP WYMPIIP VLVNGSEGIGTGWS+Y+PNY
Sbjct: 755  TKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSEGIGTGWSSYVPNY 814

Query: 182  NPRDIVANIRRLLNGEAMEAMDPWYRGFMGTIEKTATKESGVTYTVSGIIEEVNSTTLRI 361
            NPRDI+ N+RR+L GE M  MDPWYRGF GTIEKTATKE G TYTVSGIIEEV+ TTLRI
Sbjct: 815  NPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTVSGIIEEVSDTTLRI 874


>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
            predicted protein [Populus trichocarpa]
          Length = 1468

 Score =  181 bits (459), Expect = 5e-44
 Identities = 88/121 (72%), Positives = 97/121 (80%)
 Frame = +2

Query: 2    TKLSGITRFLFHKXXXXXXXXXXXXGQPIEPVWYMPIIPLVLVNGSEGIGTGWSTYIPNY 181
            T+LS ITRFLF K            GQ IEP WYMPIIP+VLVNG EGIGTGWST+IPNY
Sbjct: 788  TQLSPITRFLFPKDDDGLLDYLDEDGQTIEPNWYMPIIPMVLVNGCEGIGTGWSTFIPNY 847

Query: 182  NPRDIVANIRRLLNGEAMEAMDPWYRGFMGTIEKTATKESGVTYTVSGIIEEVNSTTLRI 361
            NPRDIVANIRRLLNGE ME M+PWYRGF GTIEK A+KE+G +YTV+G+I EVN TTLRI
Sbjct: 848  NPRDIVANIRRLLNGEMMEPMNPWYRGFKGTIEKGASKEAGCSYTVNGVINEVNETTLRI 907

Query: 362  T 364
            T
Sbjct: 908  T 908


>ref|NP_189031.1| DNA topoisomerase 2 [Arabidopsis thaliana]
            gi|1174740|sp|P30182.2|TOP2_ARATH RecName: Full=DNA
            topoisomerase 2; AltName: Full=DNA topoisomerase II
            gi|474890|gb|AAA65448.1| topoisomerase II [Arabidopsis
            thaliana] gi|9294657|dbj|BAB03006.1| DNA topoisomerase II
            [Arabidopsis thaliana] gi|332643305|gb|AEE76826.1| DNA
            topoisomerase 2 [Arabidopsis thaliana]
          Length = 1473

 Score =  179 bits (453), Expect = 3e-43
 Identities = 84/121 (69%), Positives = 96/121 (79%)
 Frame = +2

Query: 2    TKLSGITRFLFHKXXXXXXXXXXXXGQPIEPVWYMPIIPLVLVNGSEGIGTGWSTYIPNY 181
            TKLS +TR LF K            GQ IEP WYMPIIP VLVNG+EGIGTGWST+IPNY
Sbjct: 797  TKLSPVTRILFPKDDDLLLDYLNEDGQRIEPTWYMPIIPTVLVNGAEGIGTGWSTFIPNY 856

Query: 182  NPRDIVANIRRLLNGEAMEAMDPWYRGFMGTIEKTATKESGVTYTVSGIIEEVNSTTLRI 361
            NPR+IVAN+RRLLNGE+M  MDPWYRGF GTIEKTA+KE G TYT++G+ EEV+ TT+RI
Sbjct: 857  NPREIVANVRRLLNGESMVPMDPWYRGFKGTIEKTASKEGGCTYTITGLYEEVDETTIRI 916

Query: 362  T 364
            T
Sbjct: 917  T 917