BLASTX nr result

ID: Coptis23_contig00028868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028868
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265355.2| PREDICTED: transcription factor MYB23-like [...    85   1e-14
emb|CBI24140.3| unnamed protein product [Vitis vinifera]               79   7e-13
ref|XP_002265578.1| PREDICTED: uncharacterized protein LOC100258...    72   5e-11
ref|XP_002299386.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002303715.1| predicted protein [Populus trichocarpa] gi|2...    68   1e-09

>ref|XP_002265355.2| PREDICTED: transcription factor MYB23-like [Vitis vinifera]
           gi|147854236|emb|CAN83435.1| hypothetical protein
           VITISV_010137 [Vitis vinifera]
          Length = 337

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 68/178 (38%), Positives = 99/178 (55%), Gaps = 17/178 (9%)
 Frame = -1

Query: 567 ITLLPPHASSTIHPPLP------QASMSISTLDYQNQNHVWPAANDQNSPASTYFANQSS 406
           +  LPP  +    PPLP      Q +M+I   +YQN N VW  A DQ+S  +  F   SS
Sbjct: 168 VNRLPPFVTL---PPLPPTQPSLQQTMAIPNSEYQNPNPVW-TAKDQSSQYTISFPCGSS 223

Query: 405 I--TPL----SSTSMNPSGLGFLDHENCLWSDGGIESMVTPTEEEMNTAGQVMQQDKV-- 250
           I  TP+    SS+S+NP G GFLD EN +W +  +E +  P  E++ T     Q D+   
Sbjct: 224 IGSTPIISSSSSSSVNPFGFGFLD-ENLIW-NAHVEPLEGPRLEQVQTHQYQDQHDQQKN 281

Query: 249 ---VGDQVELEARDNGQDMDTSFSECSNFDLEFMESPLISCGLMYNNMNSMDHQLSWD 85
              +G+      +  GQD+D SF + S+FDLEF+ES L+S G +  +++SMD  L+W+
Sbjct: 282 KINIGEMGNDHEQKCGQDIDVSF-DSSSFDLEFVESTLLS-GAICRDLSSMD-DLAWN 336


>emb|CBI24140.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score = 78.6 bits (192), Expect = 7e-13
 Identities = 62/160 (38%), Positives = 87/160 (54%), Gaps = 17/160 (10%)
 Frame = -1

Query: 567 ITLLPPHASSTIHPPLP------QASMSISTLDYQNQNHVWPAANDQNSPASTYFANQSS 406
           +  LPP  +    PPLP      Q +M+I   +YQN N VW  A DQ+S  +  F   SS
Sbjct: 168 VNRLPPFVTL---PPLPPTQPSLQQTMAIPNSEYQNPNPVW-TAKDQSSQYTISFPCGSS 223

Query: 405 I--TPL----SSTSMNPSGLGFLDHENCLWSDGGIESMVTPTEEEMNTAGQVMQQDKV-- 250
           I  TP+    SS+S+NP G GFLD EN +W +  +E +  P  E++ T     Q D+   
Sbjct: 224 IGSTPIISSSSSSSVNPFGFGFLD-ENLIW-NAHVEPLEGPRLEQVQTHQYQDQHDQQKN 281

Query: 249 ---VGDQVELEARDNGQDMDTSFSECSNFDLEFMESPLIS 139
              +G+      +  GQD+D SF + S+FDLEF+ES L+S
Sbjct: 282 KINIGEMGNDHEQKCGQDIDVSF-DSSSFDLEFVESTLLS 320


>ref|XP_002265578.1| PREDICTED: uncharacterized protein LOC100258147 [Vitis vinifera]
           gi|297738187|emb|CBI27388.3| unnamed protein product
           [Vitis vinifera]
          Length = 345

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
 Frame = -1

Query: 555 PPHASSTIHPPLPQASMSISTLDYQNQNHVW-PAANDQNSPASTYFANQSSI---TPLSS 388
           PP  S++IHPP      +I   ++ N N+VW    +DQN  A     N+SS+   TP+  
Sbjct: 185 PPDTSNSIHPPSLHGISAIPPFEFLNPNYVWMTTVSDQNQHAVMELVNRSSMGRSTPIGP 244

Query: 387 TSMNPSGLGFLDHENCLWSDGGIESMVTPTEEEMNTAGQVMQQDKVV-GDQVELEARDNG 211
             +NPSG   L+      +   +E       +++    Q  ++DKV  G     +   NG
Sbjct: 245 YQINPSGFEVLEENYMRDTIASLE-----PRKQLEGVQQQQEEDKVCEGKADNSKELRNG 299

Query: 210 QDMDTSFSECSNFDLEFMESPLISCGL-MY--NNMNSMDHQLSW 88
           +++D SF  CS FDLE   S L+ CG  MY  +  +S   QL+W
Sbjct: 300 ENIDNSFDSCS-FDLELEYSGLLPCGTGMYCSSTSSSCIDQLTW 342


>ref|XP_002299386.1| predicted protein [Populus trichocarpa] gi|222846644|gb|EEE84191.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 61/161 (37%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
 Frame = -1

Query: 531 HPPLPQASMSISTLDYQNQNHVWPAANDQNSPASTYFANQSSI--TPLSSTSMNPSGLGF 358
           +PPL     SI T +YQN          Q    ST  A+QSSI   P+ S++ +PS  G 
Sbjct: 186 NPPLSHEFSSILTYEYQNPR-------TQTFLEST--ASQSSIGSVPIFSSTSHPSEFGM 236

Query: 357 LDHENCLWSDGGIESMVTPTEEEMNTAGQVMQQ---DKVVGDQVELEARDNGQDMDTSFS 187
           LD E+C+W+ G       PT+  +    Q  QQ   +K+ G     E    GQ+MD SF 
Sbjct: 237 LD-ESCMWAGG-----YDPTQSIIPEKKQPEQQVGIEKITGH----ELTSAGQNMDASF- 285

Query: 186 ECSNFDLEF------MESPLISCGLMYNNMNSMDHQLSWDS 82
           E SNFD +F      +ES L+ CG+ YN   S   QL+WDS
Sbjct: 286 ETSNFDFDFDFDFDFVESTLLPCGMYYN--QSPIDQLAWDS 324


>ref|XP_002303715.1| predicted protein [Populus trichocarpa] gi|222841147|gb|EEE78694.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
 Frame = -1

Query: 558 LPPHASSTIHPPLPQASMSISTLDYQNQNHVWPAANDQNSPASTYFANQSSI--TPLSST 385
           +PP   +  +PPL     SIST +YQN N +          A     ++SSI   P+SS+
Sbjct: 194 IPPVPDTNPYPPLLHKFSSISTCEYQNPNTL----------AFLESGSKSSIGSVPVSSS 243

Query: 384 SMNPSGLGFLDHENCLWSDGG--IESMVTPTEE-EMNTAGQVMQQDKVVGDQVELEARDN 214
           + +PS  G LD E C+W+ G   I+S+ +  E+ E      + + ++++G          
Sbjct: 244 TSHPSEFGMLD-ETCMWAGGYELIQSIKSEKEQPEQQVELTIEKTNELIGA--------- 293

Query: 213 GQDMDTSFSECSNFDLEFMESPLISCGLMYN 121
           GQ+M  SF E S FD +F+ES L+ CG+ YN
Sbjct: 294 GQNMVASF-ETSTFDFDFLESTLLPCGMYYN 323


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