BLASTX nr result

ID: Coptis23_contig00028866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028866
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875484.1| calcium-binding EF hand family protein [Arab...    75   4e-12
ref|XP_002323865.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_003534444.1| PREDICTED: probable calcium-binding protein ...    72   6e-11
gb|ACU19070.1| unknown [Glycine max]                                   72   6e-11
gb|AFK49407.1| unknown [Medicago truncatula]                           71   8e-11

>ref|XP_002875484.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297321322|gb|EFH51743.1| calcium-binding EF
           hand family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 178

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/49 (71%), Positives = 40/49 (81%)
 Frame = -2

Query: 258 ELQRVICSLGFKEGSKLVECETMIRAFDENRDGKIDFNEFVKLMENSFC 112
           ELQ+V+  LGFKEG+ L  C  MIR+FD N+DGKIDFNEFVK MENSFC
Sbjct: 130 ELQKVLTILGFKEGAYLDNCLVMIRSFDVNKDGKIDFNEFVKFMENSFC 178


>ref|XP_002323865.1| predicted protein [Populus trichocarpa] gi|222866867|gb|EEF03998.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/49 (69%), Positives = 38/49 (77%)
 Frame = -2

Query: 258 ELQRVICSLGFKEGSKLVECETMIRAFDENRDGKIDFNEFVKLMENSFC 112
           ELQRV   LG KEG +L +C  +IR FDEN DG+IDFNEFVK MENSFC
Sbjct: 164 ELQRVFYKLGLKEGLQLEKCRKIIRTFDENGDGRIDFNEFVKFMENSFC 212


>ref|XP_003534444.1| PREDICTED: probable calcium-binding protein CML45-like [Glycine
           max]
          Length = 207

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/49 (65%), Positives = 38/49 (77%)
 Frame = -2

Query: 258 ELQRVICSLGFKEGSKLVECETMIRAFDENRDGKIDFNEFVKLMENSFC 112
           ELQRV+C LG KE ++L  C  MIR FD N+DG+IDF EFVK+MEN FC
Sbjct: 159 ELQRVLCILGLKEAAELENCNKMIRIFDTNQDGRIDFIEFVKIMENRFC 207


>gb|ACU19070.1| unknown [Glycine max]
          Length = 207

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/49 (65%), Positives = 38/49 (77%)
 Frame = -2

Query: 258 ELQRVICSLGFKEGSKLVECETMIRAFDENRDGKIDFNEFVKLMENSFC 112
           ELQRV+C LG KE ++L  C  MIR FD N+DG+IDF EFVK+MEN FC
Sbjct: 159 ELQRVLCILGLKEAAELENCNKMIRIFDTNQDGRIDFIEFVKIMENRFC 207


>gb|AFK49407.1| unknown [Medicago truncatula]
          Length = 170

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/49 (63%), Positives = 40/49 (81%)
 Frame = -2

Query: 258 ELQRVICSLGFKEGSKLVECETMIRAFDENRDGKIDFNEFVKLMENSFC 112
           EL+RV+C LGFKEGS++  C+ MI+ FD N+DG+IDF EFVK+MEN  C
Sbjct: 122 ELKRVMCILGFKEGSEVENCQKMIKNFDANQDGRIDFIEFVKIMENRLC 170


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