BLASTX nr result

ID: Coptis23_contig00028859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028859
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001067203.1| Os12g0600100 [Oryza sativa Japonica Group] g...    96   2e-18
gb|EEC69619.1| hypothetical protein OsI_38995 [Oryza sativa Indi...    96   2e-18
ref|XP_003575855.1| PREDICTED: ankyrin repeat, PH and SEC7 domai...    94   9e-18
dbj|BAK05161.1| predicted protein [Hordeum vulgare subsp. vulgare]     91   8e-17
ref|NP_001067362.1| Os12g0636100 [Oryza sativa Japonica Group] g...    88   6e-16

>ref|NP_001067203.1| Os12g0600100 [Oryza sativa Japonica Group]
           gi|77556984|gb|ABA99780.1| TPR Domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113649710|dbj|BAF30222.1| Os12g0600100 [Oryza sativa
           Japonica Group] gi|215693388|dbj|BAG88770.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 387

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/106 (45%), Positives = 66/106 (62%)
 Frame = -2

Query: 320 WSIGVIMRKVHSEEAKVQWELXXXXXXXXXKSKGEDAFQKNDYFAATFWYTKALFKDPLN 141
           W++  I+R + +   + Q  +         KSKG++AF K DY  A ++YT A+ K PL+
Sbjct: 242 WNVDGIIRTMRTTRIEPQSAIPVEEQVSDAKSKGKEAFAKGDYLTAIYFYTLAMDKSPLD 301

Query: 140 ATLLSNRSLCYARQKNGNRALEDAMTCVMLKPDWPKAHYRAGVAWS 3
           ATL +NRSLC+ RQ+ G+RAL DA  C ML+P W KA YR G A S
Sbjct: 302 ATLFANRSLCWLRQREGDRALLDAQQCRMLRPGWSKAWYREGAALS 347


>gb|EEC69619.1| hypothetical protein OsI_38995 [Oryza sativa Indica Group]
           gi|222617416|gb|EEE53548.1| hypothetical protein
           OsJ_36760 [Oryza sativa Japonica Group]
          Length = 413

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/106 (45%), Positives = 66/106 (62%)
 Frame = -2

Query: 320 WSIGVIMRKVHSEEAKVQWELXXXXXXXXXKSKGEDAFQKNDYFAATFWYTKALFKDPLN 141
           W++  I+R + +   + Q  +         KSKG++AF K DY  A ++YT A+ K PL+
Sbjct: 268 WNVDGIIRTMRTTRIEPQSAIPVEEQVSDAKSKGKEAFAKGDYLTAIYFYTLAMDKSPLD 327

Query: 140 ATLLSNRSLCYARQKNGNRALEDAMTCVMLKPDWPKAHYRAGVAWS 3
           ATL +NRSLC+ RQ+ G+RAL DA  C ML+P W KA YR G A S
Sbjct: 328 ATLFANRSLCWLRQREGDRALLDAQQCRMLRPGWSKAWYREGAALS 373


>ref|XP_003575855.1| PREDICTED: ankyrin repeat, PH and SEC7 domain containing protein
           secG-like [Brachypodium distachyon]
          Length = 387

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/106 (44%), Positives = 65/106 (61%)
 Frame = -2

Query: 320 WSIGVIMRKVHSEEAKVQWELXXXXXXXXXKSKGEDAFQKNDYFAATFWYTKALFKDPLN 141
           WS+  I+  + S   +++  +         KSKG++AF K DYF A ++Y   +  DPL+
Sbjct: 242 WSVDGIIATMQSPLTRIEDAVSAQERIADSKSKGKEAFAKQDYFTAMYYYGLVMEIDPLD 301

Query: 140 ATLLSNRSLCYARQKNGNRALEDAMTCVMLKPDWPKAHYRAGVAWS 3
           ATL SNRSLC+ R + G+RAL+DA  C ML+P W KA YR G A S
Sbjct: 302 ATLFSNRSLCWLRMREGDRALQDAQRCKMLRPGWAKAWYREGSALS 347


>dbj|BAK05161.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 413

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 47/106 (44%), Positives = 62/106 (58%)
 Frame = -2

Query: 320 WSIGVIMRKVHSEEAKVQWELXXXXXXXXXKSKGEDAFQKNDYFAATFWYTKALFKDPLN 141
           WS+  I+  + S   +VQ            KS+G++AF K DYF A ++Y   +  DPL+
Sbjct: 268 WSVDGIITTMKSPHTRVQDRASAEERKADLKSQGKEAFAKKDYFTAMYYYGLVMEIDPLD 327

Query: 140 ATLLSNRSLCYARQKNGNRALEDAMTCVMLKPDWPKAHYRAGVAWS 3
           ATL +NRSLC+ R + G+RAL DA  C ML P W KA YR G A S
Sbjct: 328 ATLFANRSLCWLRMREGDRALADAQRCKMLHPGWSKAWYREGSALS 373


>ref|NP_001067362.1| Os12g0636100 [Oryza sativa Japonica Group]
           gi|77557174|gb|ABA99970.1| TPR Domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113649869|dbj|BAF30381.1| Os12g0636100 [Oryza sativa
           Japonica Group]
          Length = 439

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/104 (42%), Positives = 63/104 (60%)
 Frame = -2

Query: 320 WSIGVIMRKVHSEEAKVQWELXXXXXXXXXKSKGEDAFQKNDYFAATFWYTKALFKDPLN 141
           WS+  I+  V SE  +++ +          K +G+ AF+K DY  A+ +YT+AL  DP +
Sbjct: 297 WSVDGIINHVQSEIKQLEDDNFIKKRRSDMKQQGDAAFKKQDYLNASVFYTQALKVDPFD 356

Query: 140 ATLLSNRSLCYARQKNGNRALEDAMTCVMLKPDWPKAHYRAGVA 9
            TL SNRSLC+ R  +G RAL+DA  C  L+P W K++YR G A
Sbjct: 357 GTLFSNRSLCWLRMGDGERALDDANACEKLRPKWAKSYYRQGAA 400


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