BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028856
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34982.3| unnamed protein product [Vitis vinifera]              246   3e-63
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...   246   3e-63
emb|CAN81271.1| hypothetical protein VITISV_006146 [Vitis vinifera]   246   3e-63
ref|XP_002517407.1| conserved hypothetical protein [Ricinus comm...   232   6e-59
ref|XP_002300024.1| predicted protein [Populus trichocarpa] gi|2...   230   3e-58

>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score =  246 bits (629), Expect = 3e-63
 Identities = 130/227 (57%), Positives = 162/227 (71%), Gaps = 5/227 (2%)
 Frame = +3

Query: 114 NSKHIKFTIHTCSTTPSTNP--QTITKTAIKRIAEKLQTLGHI---QQHNTLQHAQVGNG 278
           N K  KF +       ++NP  QT+ KTAI+RIAEKL++LG++   +    L   +  NG
Sbjct: 59  NPKPSKFILR------ASNPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANG 112

Query: 279 IEGEIFLPFPQQLVSNRVGYTIIDDSSWTTPENPVPEPGSGFTISRFHELKKQVYMEKKG 458
             GEIF+P P QL  +RVG+TI  D SW+ PENPVPEPG+G  I+RFHEL+K+V  EKK 
Sbjct: 113 SAGEIFVPLPNQLPKHRVGHTI--DQSWSLPENPVPEPGTGGVITRFHELRKEVKREKK- 169

Query: 459 MVKRRERKVPTLAELKLSVEEXXXXXXXXXXXXXXXNVGKPGITEGIVNGIHERWRRSEV 638
           +V++ + + PTLAEL L  EE                VGK GITEGIVNGIHERWRR+EV
Sbjct: 170 LVRKEDERAPTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEV 229

Query: 639 VKIKCEDICKMDMKRTHEILERKTGGLVVWRSGSTIILYRGASYEYP 779
           VKI+CEDICK++MKRTH+ILERKTGGLV+WRSGS IILYRGA+Y+YP
Sbjct: 230 VKIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYP 276


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score =  246 bits (629), Expect = 3e-63
 Identities = 130/227 (57%), Positives = 162/227 (71%), Gaps = 5/227 (2%)
 Frame = +3

Query: 114 NSKHIKFTIHTCSTTPSTNP--QTITKTAIKRIAEKLQTLGHI---QQHNTLQHAQVGNG 278
           N K  KF +       ++NP  QT+ KTAI+RIAEKL++LG++   +    L   +  NG
Sbjct: 59  NPKPSKFILR------ASNPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANG 112

Query: 279 IEGEIFLPFPQQLVSNRVGYTIIDDSSWTTPENPVPEPGSGFTISRFHELKKQVYMEKKG 458
             GEIF+P P QL  +RVG+TI  D SW+ PENPVPEPG+G  I+RFHEL+K+V  EKK 
Sbjct: 113 SAGEIFVPLPNQLPKHRVGHTI--DQSWSLPENPVPEPGTGGVITRFHELRKEVKREKK- 169

Query: 459 MVKRRERKVPTLAELKLSVEEXXXXXXXXXXXXXXXNVGKPGITEGIVNGIHERWRRSEV 638
           +V++ + + PTLAEL L  EE                VGK GITEGIVNGIHERWRR+EV
Sbjct: 170 LVRKEDERAPTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEV 229

Query: 639 VKIKCEDICKMDMKRTHEILERKTGGLVVWRSGSTIILYRGASYEYP 779
           VKI+CEDICK++MKRTH+ILERKTGGLV+WRSGS IILYRGA+Y+YP
Sbjct: 230 VKIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYP 276


>emb|CAN81271.1| hypothetical protein VITISV_006146 [Vitis vinifera]
          Length = 1399

 Score =  246 bits (629), Expect = 3e-63
 Identities = 130/227 (57%), Positives = 162/227 (71%), Gaps = 5/227 (2%)
 Frame = +3

Query: 114 NSKHIKFTIHTCSTTPSTNP--QTITKTAIKRIAEKLQTLGHI---QQHNTLQHAQVGNG 278
           N K  KF +       ++NP  QT+ KTAI+RIAEKL++LG++   +    L   +  NG
Sbjct: 251 NPKPSKFILR------ASNPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANG 304

Query: 279 IEGEIFLPFPQQLVSNRVGYTIIDDSSWTTPENPVPEPGSGFTISRFHELKKQVYMEKKG 458
             GEIF+P P QL  +RVG+TI  D SW+ PENPVPEPG+G  I+RFHEL+K+V  EKK 
Sbjct: 305 SAGEIFVPLPNQLPKHRVGHTI--DQSWSLPENPVPEPGTGGVITRFHELRKEVKREKK- 361

Query: 459 MVKRRERKVPTLAELKLSVEEXXXXXXXXXXXXXXXNVGKPGITEGIVNGIHERWRRSEV 638
           +V++ + + PTLAEL L  EE                VGK GITEGIVNGIHERWRR+EV
Sbjct: 362 LVRKEDERAPTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEV 421

Query: 639 VKIKCEDICKMDMKRTHEILERKTGGLVVWRSGSTIILYRGASYEYP 779
           VKI+CEDICK++MKRTH+ILERKTGGLV+WRSGS IILYRGA+Y+YP
Sbjct: 422 VKIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYP 468


>ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
           gi|223543418|gb|EEF44949.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1009

 Score =  232 bits (592), Expect = 6e-59
 Identities = 122/212 (57%), Positives = 150/212 (70%), Gaps = 3/212 (1%)
 Frame = +3

Query: 153 TTPSTNPQTITKTAIKRIAEKLQTLGHIQQHNTLQHAQVGNGI---EGEIFLPFPQQLVS 323
           T   +N +T+  +AI+RIA+KL++LG   +HN   H +        EGEIF+P P +L  
Sbjct: 42  TIHCSNSKTVPSSAIQRIADKLRSLG-FAEHNPEPHTRNSAETKQREGEIFIPLPNELSK 100

Query: 324 NRVGYTIIDDSSWTTPENPVPEPGSGFTISRFHELKKQVYMEKKGMVKRRERKVPTLAEL 503
            RVG+T+  D SW+TPENPVP PGSG  I R+HEL+KQV  E++   K+RE KVPTLAEL
Sbjct: 101 YRVGHTL--DPSWSTPENPVPRPGSGNAILRYHELRKQVKKERED--KKREAKVPTLAEL 156

Query: 504 KLSVEEXXXXXXXXXXXXXXXNVGKPGITEGIVNGIHERWRRSEVVKIKCEDICKMDMKR 683
            LS EE                VGK GITEGIVNGIHERWRRSEVVKI CED+C+M+MKR
Sbjct: 157 SLSEEELRRLRRIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMNMKR 216

Query: 684 THEILERKTGGLVVWRSGSTIILYRGASYEYP 779
           TH++LERKTGGLVVWR+GS I+LYRG +Y YP
Sbjct: 217 THDLLERKTGGLVVWRAGSKIVLYRGVNYIYP 248


>ref|XP_002300024.1| predicted protein [Populus trichocarpa] gi|222847282|gb|EEE84829.1|
           predicted protein [Populus trichocarpa]
          Length = 1012

 Score =  230 bits (586), Expect = 3e-58
 Identities = 121/222 (54%), Positives = 153/222 (68%)
 Frame = +3

Query: 114 NSKHIKFTIHTCSTTPSTNPQTITKTAIKRIAEKLQTLGHIQQHNTLQHAQVGNGIEGEI 293
           N+  +KF + + S   + NPQT+  +AI+RIA+KL++LG  ++  T      G     EI
Sbjct: 43  NNPSLKFLVRSSS---ADNPQTLPHSAIQRIADKLRSLGFTEETETKAQTTAG-----EI 94

Query: 294 FLPFPQQLVSNRVGYTIIDDSSWTTPENPVPEPGSGFTISRFHELKKQVYMEKKGMVKRR 473
           F+P P +L   RVG T+  D SW+TPENPVP PGSG  ISR+HEL+++V  E++   K+ 
Sbjct: 95  FVPLPNRLPKYRVGQTL--DPSWSTPENPVPVPGSGKAISRYHELRREVKREREA--KKG 150

Query: 474 ERKVPTLAELKLSVEEXXXXXXXXXXXXXXXNVGKPGITEGIVNGIHERWRRSEVVKIKC 653
           E KVP+LAEL L  EE                VGK GITEGIVNGIHERWRRSEVVKI C
Sbjct: 151 EAKVPSLAELSLPNEELRRLRTIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVC 210

Query: 654 EDICKMDMKRTHEILERKTGGLVVWRSGSTIILYRGASYEYP 779
           ED+C+M+MKRTH++LERKTGGLVVWR GS I+LYRGA Y+YP
Sbjct: 211 EDLCRMNMKRTHDLLERKTGGLVVWRVGSKIVLYRGADYKYP 252