BLASTX nr result

ID: Coptis23_contig00028840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028840
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277891.1| PREDICTED: uncharacterized protein LOC100256...   265   9e-69
ref|XP_002524043.1| conserved hypothetical protein [Ricinus comm...   257   1e-66
ref|XP_002268652.2| PREDICTED: uncharacterized protein LOC100258...   245   5e-63
ref|XP_003544249.1| PREDICTED: uncharacterized protein LOC100786...   244   9e-63
ref|XP_003518266.1| PREDICTED: uncharacterized protein LOC100775...   239   4e-61

>ref|XP_002277891.1| PREDICTED: uncharacterized protein LOC100256226 [Vitis vinifera]
          Length = 350

 Score =  265 bits (676), Expect = 9e-69
 Identities = 124/186 (66%), Positives = 142/186 (76%)
 Frame = +3

Query: 144 RHLQTHKAVCHHSCKRTLCHLGSVPGSSDVETCSVPQSSCLQHWFKNWTESRKNKLTAST 323
           + L ++   C HS ++        P     ET SV QSS  QHWFKNW E RK+KLTAST
Sbjct: 63  KELTSNSQFCSHSSRKVPVCFDHSPNLLSGETYSVLQSSGFQHWFKNWQEQRKHKLTAST 122

Query: 324 FAGAIGFWRGRRVKLWQEKIGAVEPFSGNLATIWGNIKEQEALERYKLITGNVVLFPEFQ 503
           F GA+GFW  RRV+LW EK+GA +PFSGNLAT W NIKE+EALERYKLITGN VLFPEFQ
Sbjct: 123 FGGAVGFWPRRRVQLWLEKLGATKPFSGNLATCWSNIKEEEALERYKLITGNTVLFPEFQ 182

Query: 504 VYGNKSPDDNWLGCSPDGVVDNIVYGLSYHGVLEIKCPFFHGDKQRSYPWSRVPLYFIPQ 683
           VYG K P+DNWL  SPDG+VD++VYGL   GVLEIKCPFF+GDK  + PWSRVPLY+IPQ
Sbjct: 183 VYGKKDPEDNWLAASPDGIVDSLVYGLHSRGVLEIKCPFFNGDKSIASPWSRVPLYYIPQ 242

Query: 684 AQGLME 701
           AQGLME
Sbjct: 243 AQGLME 248


>ref|XP_002524043.1| conserved hypothetical protein [Ricinus communis]
           gi|223536770|gb|EEF38411.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 317

 Score =  257 bits (657), Expect = 1e-66
 Identities = 122/203 (60%), Positives = 148/203 (72%), Gaps = 2/203 (0%)
 Frame = +3

Query: 99  LVNIERFAH--CFYSINRHLQTHKAVCHHSCKRTLCHLGSVPGSSDVETCSVPQSSCLQH 272
           L NI R++     Y  +++   +  +C    KR   H          ET S+ QS  LQH
Sbjct: 13  LSNIRRYSSQSIVYPTSKNFSANTEICDIFSKRYSSHSCRPLEFPTGETSSILQSRALQH 72

Query: 273 WFKNWTESRKNKLTASTFAGAIGFWRGRRVKLWQEKIGAVEPFSGNLATIWGNIKEQEAL 452
           WFKNW E RK+KLTASTF GAIGFW GRRV+LW EK+GA++PFSGNLAT W NIKE+EAL
Sbjct: 73  WFKNWQEQRKHKLTASTFGGAIGFWHGRRVQLWLEKLGAIKPFSGNLATCWSNIKEEEAL 132

Query: 453 ERYKLITGNVVLFPEFQVYGNKSPDDNWLGCSPDGVVDNIVYGLSYHGVLEIKCPFFHGD 632
           ERYKLITGN V+FP+FQVYG K+ +D+WL  SPDGV+D++VYGL   GVLEIKCPFF GD
Sbjct: 133 ERYKLITGNTVIFPKFQVYGVKNSEDDWLAASPDGVIDSLVYGLPSRGVLEIKCPFFDGD 192

Query: 633 KQRSYPWSRVPLYFIPQAQGLME 701
             ++ PW R+PLY+IPQAQGLME
Sbjct: 193 MSKASPWKRIPLYYIPQAQGLME 215


>ref|XP_002268652.2| PREDICTED: uncharacterized protein LOC100258006 [Vitis vinifera]
          Length = 312

 Score =  245 bits (626), Expect = 5e-63
 Identities = 111/144 (77%), Positives = 124/144 (86%)
 Frame = +3

Query: 270 HWFKNWTESRKNKLTASTFAGAIGFWRGRRVKLWQEKIGAVEPFSGNLATIWGNIKEQEA 449
           HWFKNW E RK+KLTASTF GA+GFW  RRV+LW EK+GA++PFSGNLAT W NIKE+EA
Sbjct: 79  HWFKNWQEQRKHKLTASTFGGAVGFWPRRRVQLWLEKLGAIKPFSGNLATCWSNIKEEEA 138

Query: 450 LERYKLITGNVVLFPEFQVYGNKSPDDNWLGCSPDGVVDNIVYGLSYHGVLEIKCPFFHG 629
           LERYKLITGN VLFPEFQVYG K+P+DNWL  SPDGVV+ +VYGL   GVLEIKCPFF+G
Sbjct: 139 LERYKLITGNTVLFPEFQVYGKKNPEDNWLAASPDGVVERLVYGLHSRGVLEIKCPFFNG 198

Query: 630 DKQRSYPWSRVPLYFIPQAQGLME 701
           DK  + PWSRVPLY IPQAQGLME
Sbjct: 199 DKSIASPWSRVPLYCIPQAQGLME 222


>ref|XP_003544249.1| PREDICTED: uncharacterized protein LOC100786030 [Glycine max]
          Length = 720

 Score =  244 bits (624), Expect = 9e-63
 Identities = 115/171 (67%), Positives = 139/171 (81%)
 Frame = +3

Query: 189 RTLCHLGSVPGSSDVETCSVPQSSCLQHWFKNWTESRKNKLTASTFAGAIGFWRGRRVKL 368
           R L  LG +   + VET SV Q+SCLQHWFKNW   R+NKLTASTFA AIGFWR +RV+L
Sbjct: 72  RKLGSLGGMLKYTSVETYSVLQASCLQHWFKNWQALRRNKLTASTFAAAIGFWRRQRVQL 131

Query: 369 WQEKIGAVEPFSGNLATIWGNIKEQEALERYKLITGNVVLFPEFQVYGNKSPDDNWLGCS 548
           W EKIGA+EPFSGNLAT W NIKE++ALERYKLITGN VLFPEFQVY +  P+D+WL  S
Sbjct: 132 WLEKIGAIEPFSGNLATCWSNIKEEDALERYKLITGNTVLFPEFQVY-DAHPEDSWLAAS 190

Query: 549 PDGVVDNIVYGLSYHGVLEIKCPFFHGDKQRSYPWSRVPLYFIPQAQGLME 701
           PDGV+D++V+ L   GVLEIKCP+F GD  +++PW R+P+++IPQAQGLME
Sbjct: 191 PDGVIDSMVHELPSCGVLEIKCPYFDGDISKAFPWFRIPIHYIPQAQGLME 241


>ref|XP_003518266.1| PREDICTED: uncharacterized protein LOC100775211 [Glycine max]
          Length = 668

 Score =  239 bits (610), Expect = 4e-61
 Identities = 113/184 (61%), Positives = 141/184 (76%)
 Frame = +3

Query: 150 LQTHKAVCHHSCKRTLCHLGSVPGSSDVETCSVPQSSCLQHWFKNWTESRKNKLTASTFA 329
           L+  + +  ++  R L  LG +   + VET SV Q+SCLQHWFKNW   R+NKLTASTFA
Sbjct: 7   LENLRPITSNNPSRKLGSLGGMLKYTSVETYSVLQASCLQHWFKNWQALRRNKLTASTFA 66

Query: 330 GAIGFWRGRRVKLWQEKIGAVEPFSGNLATIWGNIKEQEALERYKLITGNVVLFPEFQVY 509
            AIGFW  +RV+LW EKIGA+EPFSGNLAT W NIKE++ALERYKLITGN V FPEFQVY
Sbjct: 67  AAIGFWHRQRVQLWLEKIGAIEPFSGNLATCWSNIKEEDALERYKLITGNTVRFPEFQVY 126

Query: 510 GNKSPDDNWLGCSPDGVVDNIVYGLSYHGVLEIKCPFFHGDKQRSYPWSRVPLYFIPQAQ 689
            +  P+D+WL  SPDGV+D++V+ L   GVLEIKCP+F GD  +++PW R+P+ +IPQ Q
Sbjct: 127 -DAHPEDSWLAASPDGVIDSMVHELPSCGVLEIKCPYFDGDISKAFPWFRIPILYIPQTQ 185

Query: 690 GLME 701
           GLME
Sbjct: 186 GLME 189


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