BLASTX nr result

ID: Coptis23_contig00028815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028815
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA07070.1| beta-D-glucosidase [Tropaeolum majus]                 136   2e-30
gb|AAQ17461.1| beta-D-glucosidase [Gossypium hirsutum]                130   1e-28
gb|AEP33580.1| b-1,4-glucanase [Gossypium gossypioides]               129   2e-28
gb|AEP33579.1| b-1,4-glucanase [Gossypium aridum]                     129   2e-28
gb|AEP33577.1| b-1,4-glucanase [Gossypium davidsonii] gi|3479539...   129   2e-28

>emb|CAA07070.1| beta-D-glucosidase [Tropaeolum majus]
          Length = 654

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/69 (89%), Positives = 64/69 (92%)
 Frame = +2

Query: 5   MDALVAAWLPGSEGQGIPDVLFGDYKFTGKLARTWFKTVDQLPMNVGDSHYDPLFPFGFG 184
           MDALVAAWLPG+EGQG+ DVLFGDY FTGKLARTWFKTVDQLPMNVGD HYDPLFPFGFG
Sbjct: 561 MDALVAAWLPGTEGQGVTDVLFGDYGFTGKLARTWFKTVDQLPMNVGDKHYDPLFPFGFG 620

Query: 185 LTT*PKNRT 211
           LTT P NRT
Sbjct: 621 LTTKPSNRT 629


>gb|AAQ17461.1| beta-D-glucosidase [Gossypium hirsutum]
          Length = 628

 Score =  130 bits (327), Expect = 1e-28
 Identities = 59/69 (85%), Positives = 64/69 (92%)
 Frame = +2

Query: 2   SMDALVAAWLPGSEGQGIPDVLFGDYKFTGKLARTWFKTVDQLPMNVGDSHYDPLFPFGF 181
           S+DALVAAWLPG+EGQG+ DVLFGDY FTGKLARTWFKTVDQLPMNVGD HYDPLFPFGF
Sbjct: 559 SVDALVAAWLPGTEGQGVSDVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLFPFGF 618

Query: 182 GLTT*PKNR 208
           GLTT P ++
Sbjct: 619 GLTTKPTHQ 627


>gb|AEP33580.1| b-1,4-glucanase [Gossypium gossypioides]
          Length = 627

 Score =  129 bits (324), Expect = 2e-28
 Identities = 59/66 (89%), Positives = 61/66 (92%)
 Frame = +2

Query: 2   SMDALVAAWLPGSEGQGIPDVLFGDYKFTGKLARTWFKTVDQLPMNVGDSHYDPLFPFGF 181
           SMDALVAAWLPGSEGQG+ DVLFGDY F+GKL RTWFKTVDQLPMNVGD HYDPLFPFGF
Sbjct: 558 SMDALVAAWLPGSEGQGVADVLFGDYGFSGKLPRTWFKTVDQLPMNVGDPHYDPLFPFGF 617

Query: 182 GLTT*P 199
           GLTT P
Sbjct: 618 GLTTEP 623


>gb|AEP33579.1| b-1,4-glucanase [Gossypium aridum]
          Length = 627

 Score =  129 bits (324), Expect = 2e-28
 Identities = 59/66 (89%), Positives = 61/66 (92%)
 Frame = +2

Query: 2   SMDALVAAWLPGSEGQGIPDVLFGDYKFTGKLARTWFKTVDQLPMNVGDSHYDPLFPFGF 181
           SMDALVAAWLPGSEGQG+ DVLFGDY F+GKL RTWFKTVDQLPMNVGD HYDPLFPFGF
Sbjct: 558 SMDALVAAWLPGSEGQGVADVLFGDYGFSGKLPRTWFKTVDQLPMNVGDPHYDPLFPFGF 617

Query: 182 GLTT*P 199
           GLTT P
Sbjct: 618 GLTTEP 623


>gb|AEP33577.1| b-1,4-glucanase [Gossypium davidsonii] gi|347953906|gb|AEP33578.1|
           b-1,4-glucanase [Gossypium klotzschianum]
          Length = 627

 Score =  129 bits (324), Expect = 2e-28
 Identities = 59/66 (89%), Positives = 61/66 (92%)
 Frame = +2

Query: 2   SMDALVAAWLPGSEGQGIPDVLFGDYKFTGKLARTWFKTVDQLPMNVGDSHYDPLFPFGF 181
           SMDALVAAWLPGSEGQG+ DVLFGDY F+GKL RTWFKTVDQLPMNVGD HYDPLFPFGF
Sbjct: 558 SMDALVAAWLPGSEGQGVTDVLFGDYGFSGKLPRTWFKTVDQLPMNVGDPHYDPLFPFGF 617

Query: 182 GLTT*P 199
           GLTT P
Sbjct: 618 GLTTEP 623


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