BLASTX nr result

ID: Coptis23_contig00028814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028814
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282744.1| PREDICTED: oxygen-evolving enhancer protein ...   227   2e-57
ref|XP_002522826.1| Oxygen-evolving enhancer protein 3-1, chloro...   212   8e-53
ref|XP_002319801.1| predicted protein [Populus trichocarpa] gi|2...   202   5e-50
ref|XP_003540422.1| PREDICTED: oxygen-evolving enhancer protein ...   196   4e-48
ref|XP_003541875.1| PREDICTED: oxygen-evolving enhancer protein ...   194   2e-47

>ref|XP_002282744.1| PREDICTED: oxygen-evolving enhancer protein 3-1, chloroplastic
           [Vitis vinifera] gi|147768263|emb|CAN78127.1|
           hypothetical protein VITISV_028757 [Vitis vinifera]
           gi|302143202|emb|CBI20497.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  227 bits (578), Expect = 2e-57
 Identities = 123/233 (52%), Positives = 156/233 (66%)
 Frame = -3

Query: 732 MACLANLNCISPTXXXXXXXXXXXVENTSRRLAVVGLSSNETEQSQEHPAQLPTNNFVSR 553
           MA LANL+  S T              T +R+ ++G    + EQ QE           S 
Sbjct: 1   MAHLANLHGASETLPSIFKLRGDL-RRTRKRVTIIGFLCKKAEQIQEQ----------SF 49

Query: 552 QTTRRVVIGLAAVALSLQSGIEKALAEDNGYWNTGPLTVPLVSSKIANEETGTRTFLKKG 373
           Q TRR  +GL+++A+   SGI  ALAEDNGYW TGPL VP V + I N+ETGTR+FLKKG
Sbjct: 50  QATRRSALGLSSIAILGNSGIGPALAEDNGYWLTGPLPVPTVDNDIVNKETGTRSFLKKG 109

Query: 372 IFVANIGPKGSAYRLKKYAFDLMGMEDILGQDAWRYVRMYLRLKSSIMYYDFDTVISASP 193
           +++A++G KG   RLKKYAFDL+ +ED++ +DAW Y   YLRLKS+ MYYDFD +ISA P
Sbjct: 110 LYIADVGTKGRMLRLKKYAFDLIALEDLMDKDAWNYFTKYLRLKSTFMYYDFDKLISAVP 169

Query: 192 VNDKGPLTDLAKRLFDSVEKLEAAVKMHSLPQAESCYQDTTAILQEVMETRMA 34
           V++K PLTDLA RLFD VEKLE AVK+  + Q ES Y+DT  +LQEVM+ RMA
Sbjct: 170 VDEKQPLTDLANRLFDCVEKLEDAVKIRDISQTESRYKDTKTVLQEVMD-RMA 221


>ref|XP_002522826.1| Oxygen-evolving enhancer protein 3-1, chloroplast precursor,
           putative [Ricinus communis] gi|223537910|gb|EEF39524.1|
           Oxygen-evolving enhancer protein 3-1, chloroplast
           precursor, putative [Ricinus communis]
          Length = 224

 Score =  212 bits (539), Expect = 8e-53
 Identities = 118/230 (51%), Positives = 151/230 (65%), Gaps = 1/230 (0%)
 Frame = -3

Query: 732 MACLANLNCISPTXXXXXXXXXXXVENTSRRLAVVGLSSNETEQSQEHPAQLPTNNFVSR 553
           MA LANLN IS              + T RR  ++GL   +    +EHP Q         
Sbjct: 1   MAHLANLNGISENCPAIPKITNK--QRTKRRANIIGLLGKKQVNYEEHPLQ--------- 49

Query: 552 QTTRRVVIGLAAVALSLQSGIEKALAEDNGYWNTG-PLTVPLVSSKIANEETGTRTFLKK 376
            TTRR+ +GLA+VAL   SG   + AEDNG+W    PL VP V +K+ANE+TGTR+FLKK
Sbjct: 50  -TTRRLALGLASVALIGNSGNGVSHAEDNGFWQLDFPLIVPSVDNKLANEKTGTRSFLKK 108

Query: 375 GIFVANIGPKGSAYRLKKYAFDLMGMEDILGQDAWRYVRMYLRLKSSIMYYDFDTVISAS 196
           GI++A+IG KGS YR++K  FDL+ +ED++G D   YVR YLRLKS+ MYYDFD VISA+
Sbjct: 109 GIYMADIGVKGSMYRIRKCGFDLLALEDLIGPDTLNYVRKYLRLKSTFMYYDFDKVISAA 168

Query: 195 PVNDKGPLTDLAKRLFDSVEKLEAAVKMHSLPQAESCYQDTTAILQEVME 46
           PV+DK  LTDLA +LFD+ E+LE A +  +LP+ E  YQ T  ILQEVM+
Sbjct: 169 PVSDKQSLTDLANKLFDNFEELEDASRRKNLPETELSYQGTKVILQEVMD 218


>ref|XP_002319801.1| predicted protein [Populus trichocarpa] gi|222858177|gb|EEE95724.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  202 bits (515), Expect = 5e-50
 Identities = 112/229 (48%), Positives = 149/229 (65%)
 Frame = -3

Query: 732 MACLANLNCISPTXXXXXXXXXXXVENTSRRLAVVGLSSNETEQSQEHPAQLPTNNFVSR 553
           MA L NLN ++ T            +   RR+ + GL   +       P  L  N+F   
Sbjct: 1   MAHLTNLNGVTETLPAIPKLINV--QKPQRRMKITGLLGKK-------PVNLQGNSF--- 48

Query: 552 QTTRRVVIGLAAVALSLQSGIEKALAEDNGYWNTGPLTVPLVSSKIANEETGTRTFLKKG 373
           QTTRR+ +GLA++AL        +LAEDN +    PL VP   +K+ANEETGTR+FLKKG
Sbjct: 49  QTTRRLALGLASIALIGNPSTGVSLAEDNWWARDIPLPVPSAENKLANEETGTRSFLKKG 108

Query: 372 IFVANIGPKGSAYRLKKYAFDLMGMEDILGQDAWRYVRMYLRLKSSIMYYDFDTVISASP 193
           I++AN+G +GSA R+K+YAFDL+ +ED++G D   YVR YLR+KS+ MYYD D +ISA P
Sbjct: 109 IYMANVGLQGSARRVKRYAFDLLALEDLIGPDTLNYVRKYLRIKSTFMYYDLDRIISAVP 168

Query: 192 VNDKGPLTDLAKRLFDSVEKLEAAVKMHSLPQAESCYQDTTAILQEVME 46
           V+DK PLTDLA RLFD+ EKLE A +  +L   +S Y+DT A+LQEVM+
Sbjct: 169 VDDKQPLTDLANRLFDNFEKLEDASRRKNLSDTKSSYRDTKALLQEVMQ 217


>ref|XP_003540422.1| PREDICTED: oxygen-evolving enhancer protein 3-1, chloroplastic-like
           [Glycine max]
          Length = 250

 Score =  196 bits (498), Expect = 4e-48
 Identities = 107/232 (46%), Positives = 151/232 (65%), Gaps = 3/232 (1%)
 Frame = -3

Query: 732 MACLANLN-CISPTXXXXXXXXXXXVENTSRRLAVVG-LSSNETEQSQEHPAQLPTNNFV 559
           MA + NL+  +S T            ++ ++R  V+G L S   +++ E   Q       
Sbjct: 19  MAPVTNLHGAVSKTLIPITCHLPNAHKSITKRGQVIGFLGSKAQKEASECQVQA------ 72

Query: 558 SRQTTRRVVIGLAAVALSLQSGIEKALAEDNGYW-NTGPLTVPLVSSKIANEETGTRTFL 382
              T R   +GLA V L+ Q   + +LA+DNG+W    PL  P V++ IANE+TGTR+FL
Sbjct: 73  ---TRRAAALGLATVVLTWQFNDKVSLAKDNGFWYEDHPLPGPTVTNNIANEKTGTRSFL 129

Query: 381 KKGIFVANIGPKGSAYRLKKYAFDLMGMEDILGQDAWRYVRMYLRLKSSIMYYDFDTVIS 202
           K+G+++ANIG KGS +R+KKYAFDL+ M D++ +D   YVR YLRLKS+ MYYDFD VIS
Sbjct: 130 KRGLYIANIGVKGSVFRIKKYAFDLLAMADLIAEDTLNYVRKYLRLKSTFMYYDFDKVIS 189

Query: 201 ASPVNDKGPLTDLAKRLFDSVEKLEAAVKMHSLPQAESCYQDTTAILQEVME 46
           A PV+DK  LTD+A +LFD+ E+LE A +  SLP+ +SCYQ+T  +L+EVM+
Sbjct: 190 AIPVDDKQQLTDMANKLFDNFERLEEASRKKSLPETKSCYQETEVMLKEVMD 241


>ref|XP_003541875.1| PREDICTED: oxygen-evolving enhancer protein 3-1, chloroplastic-like
           [Glycine max]
          Length = 233

 Score =  194 bits (492), Expect = 2e-47
 Identities = 103/231 (44%), Positives = 148/231 (64%), Gaps = 2/231 (0%)
 Frame = -3

Query: 732 MACLANLN-CISPTXXXXXXXXXXXVENTSRRLAVVGLSSNETEQSQEHPAQLPTNNFVS 556
           MA L NL+  +S T            ++ ++R  V+G   ++T Q       +       
Sbjct: 1   MAPLTNLHGAVSKTLIPITCHLPNAHKSITKRGQVIGFLGSKTHQKDASECAV------- 53

Query: 555 RQTTRRVVIGLAAVALSLQSGIEKALAEDNGYW-NTGPLTVPLVSSKIANEETGTRTFLK 379
           + T R   +GLA V L+ +   + +LA+DNG+W    PL  P V++ IAN +TGTR+FLK
Sbjct: 54  QATRRAAALGLATVVLTWKFNDKISLAKDNGFWYEDHPLPGPTVTNNIANAKTGTRSFLK 113

Query: 378 KGIFVANIGPKGSAYRLKKYAFDLMGMEDILGQDAWRYVRMYLRLKSSIMYYDFDTVISA 199
           +GI++ANIG KGS +R+KKYAFDL+ M D++ +D   YVR YLRLKS+ MYYDFD +I A
Sbjct: 114 RGIYIANIGVKGSVFRIKKYAFDLLAMADLIAEDTLNYVRKYLRLKSTFMYYDFDKIIPA 173

Query: 198 SPVNDKGPLTDLAKRLFDSVEKLEAAVKMHSLPQAESCYQDTTAILQEVME 46
            PV+DK  LTD+A +LFD+ E+LE A +  SLP+ +SCYQ+T  +L+EVM+
Sbjct: 174 IPVDDKQQLTDMANKLFDNFERLEEASRKKSLPETKSCYQETEVMLKEVMD 224


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