BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028797
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30660.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]   146   2e-33
ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
ref|XP_002522543.1| pentatricopeptide repeat-containing protein,...   137   9e-31

>emb|CBI30660.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/99 (69%), Positives = 83/99 (83%)
 Frame = +1

Query: 1   IQSDSPSHGQKIHAHILKTGFEPNTNVSIKLLILYIRSNCLLYARRVLDEMCKPTVSSYN 180
           I SD PSHGQKIH+HILK GFEPNTNVSIKLLIL+++S CL YAR++ DEM +PT+S+YN
Sbjct: 53  INSDFPSHGQKIHSHILKIGFEPNTNVSIKLLILHLKSRCLRYARQLFDEMHQPTLSAYN 112

Query: 181 SMIAGYLKHGQVEESVGLVRELVLSNQRPDGFTLSMILK 297
            MI+GYLKHGQ+EE + LV  L  S ++PDGFT SMILK
Sbjct: 113 YMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTFSMILK 151


>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial [Vitis vinifera]
          Length = 533

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/99 (69%), Positives = 83/99 (83%)
 Frame = +1

Query: 1   IQSDSPSHGQKIHAHILKTGFEPNTNVSIKLLILYIRSNCLLYARRVLDEMCKPTVSSYN 180
           I SD PSHGQKIH+HILK GFEPNTNVSIKLLIL+++S CL YAR++ DEM +PT+S+YN
Sbjct: 53  INSDFPSHGQKIHSHILKIGFEPNTNVSIKLLILHLKSRCLRYARQLFDEMHQPTLSAYN 112

Query: 181 SMIAGYLKHGQVEESVGLVRELVLSNQRPDGFTLSMILK 297
            MI+GYLKHGQ+EE + LV  L  S ++PDGFT SMILK
Sbjct: 113 YMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTFSMILK 151


>emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]
          Length = 504

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/99 (69%), Positives = 83/99 (83%)
 Frame = +1

Query: 1   IQSDSPSHGQKIHAHILKTGFEPNTNVSIKLLILYIRSNCLLYARRVLDEMCKPTVSSYN 180
           I SD PSHGQKIH+HILK GFEPNTNVSIKLLIL+++S CL YAR++ DEM +PT+S+YN
Sbjct: 53  INSDFPSHGQKIHSHILKIGFEPNTNVSIKLLILHLKSRCLRYARQLFDEMHQPTLSAYN 112

Query: 181 SMIAGYLKHGQVEESVGLVRELVLSNQRPDGFTLSMILK 297
            MI+GYLKHGQ+EE + LV  L  S ++PDGFT SMILK
Sbjct: 113 YMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTFSMILK 151


>ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial-like [Glycine max]
          Length = 525

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/101 (65%), Positives = 84/101 (83%)
 Frame = +1

Query: 1   IQSDSPSHGQKIHAHILKTGFEPNTNVSIKLLILYIRSNCLLYARRVLDEMCKPTVSSYN 180
           I S++PSHGQKIH+ ILK+GF PNTN+SIKLLILY++ NCL YAR+V D++   T+S+YN
Sbjct: 47  INSETPSHGQKIHSSILKSGFVPNTNISIKLLILYLKCNCLRYARQVFDDLRDRTLSAYN 106

Query: 181 SMIAGYLKHGQVEESVGLVRELVLSNQRPDGFTLSMILKLS 303
            MI+GYLK  QVEES+GLV  L++S ++PDGFT SMILK S
Sbjct: 107 YMISGYLKQDQVEESLGLVHRLLVSGEKPDGFTFSMILKAS 147


>ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538234|gb|EEF39843.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 530

 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/101 (66%), Positives = 82/101 (81%)
 Frame = +1

Query: 1   IQSDSPSHGQKIHAHILKTGFEPNTNVSIKLLILYIRSNCLLYARRVLDEMCKPTVSSYN 180
           I S++P HGQKIHAHI+KTGF PNTNVSIKLLILY++  CL YAR++ DE+ + T+S+YN
Sbjct: 53  INSNTPFHGQKIHAHIVKTGFIPNTNVSIKLLILYLKCGCLKYARQMFDELPQRTLSAYN 112

Query: 181 SMIAGYLKHGQVEESVGLVRELVLSNQRPDGFTLSMILKLS 303
            +I GYLK G V++S+ LVR LVL  QRPDGFT SMILK S
Sbjct: 113 YLIGGYLKLGLVQDSMNLVRRLVLEGQRPDGFTYSMILKAS 153