BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028790
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...    70   4e-10
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    69   8e-10
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    69   1e-09
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    69   1e-09
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    68   2e-09

>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
           gi|241936261|gb|EES09406.1| hypothetical protein
           SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 36/124 (29%), Positives = 60/124 (48%)
 Frame = -3

Query: 396 MKTISWNCRGCGSPSTIRHLKHLITLENPDILFLSETKASSQSIAFLIQQLNYPHHFSVP 217
           MKT+ WNCRG G+P+T++ L+ L     P ++F+ ET+ S   +  L   L++ + F+V 
Sbjct: 1   MKTLCWNCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVN 60

Query: 216 PIHTAGGLCLLWKSGXXXXXXXXXXXXXXXXIKNDPHQSWIACFFYGSPYKTFRNTSWDP 37
               +GGL L W +                 I     +     F YG P ++FR  +WD 
Sbjct: 61  SSGRSGGLGLFWNNDVLLSIQKYSNYHIDTIISEHGKEPRRMSFIYGEPNRSFRYRTWDI 120

Query: 36  IRNL 25
           ++ +
Sbjct: 121 MKQM 124


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 38/121 (31%), Positives = 55/121 (45%)
 Frame = -3

Query: 387 ISWNCRGCGSPSTIRHLKHLITLENPDILFLSETKASSQSIAFLIQQLNYPHHFSVPPIH 208
           ISWNCRG G+P T+  L  +     PD +FL ET   S  +  L  +L +   F V  + 
Sbjct: 310 ISWNCRGLGNPRTVLALCEINKSRKPDFIFLIETLVHSAQVEKLKSKLGFEGAFCVDRVG 369

Query: 207 TAGGLCLLWKSGXXXXXXXXXXXXXXXXIKNDPHQSWIACFFYGSPYKTFRNTSWDPIRN 28
             GGL  LW+                  +  +    W    FYG P ++ R+ SW+ +R+
Sbjct: 370 RGGGLAFLWRKAGMFSLLXYSQSHIDMEVSEEDGLQWRVTGFYGFPDRSQRHLSWNLLRS 429

Query: 27  L 25
           L
Sbjct: 430 L 430


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 30/73 (41%), Positives = 43/73 (58%)
 Frame = -3

Query: 396 MKTISWNCRGCGSPSTIRHLKHLITLENPDILFLSETKASSQSIAFLIQQLNYPHHFSVP 217
           MK + WNC+G G+P T+R L+ L+    PD LF+SETK +   +    + L +   F V 
Sbjct: 1   MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTKNIVEQKKESLGFSGAFGVS 60

Query: 216 PIHTAGGLCLLWK 178
            +  AGGLC+ WK
Sbjct: 61  CVGRAGGLCMFWK 73


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 36/126 (28%), Positives = 60/126 (47%)
 Frame = -3

Query: 396 MKTISWNCRGCGSPSTIRHLKHLITLENPDILFLSETKASSQSIAFLIQQLNYPHHFSVP 217
           M+ +SWNC+G G+  T+RHL+ +  L  P+++FL ETK     +  ++  L +    +V 
Sbjct: 1   MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60

Query: 216 PIHTAGGLCLLWKSGXXXXXXXXXXXXXXXXIKNDPHQSWIACFFYGSPYKTFRNTSWDP 37
           PI  +GGL L+WK                  +     + ++ C  YG P +  R   W+ 
Sbjct: 61  PIGKSGGLALMWKDSVQIKVLQSDKRLIDALLIWQDKEFYLTC-IYGEPVQAERGELWER 119

Query: 36  IRNLDL 19
           +  L L
Sbjct: 120 LTRLGL 125


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
           gi|976278|gb|AAA75254.1| reverse transcriptase
           [Arabidopsis thaliana]
          Length = 1333

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
 Frame = -3

Query: 396 MKTISWNCRGCG--SPSTIRHLKHLITLENPDILFLSETKASSQSIAFLIQQLNYPHHFS 223
           M  +SWNC+G G     TI  L  +     P++LFL ETK  S  +  L + L Y   F+
Sbjct: 1   MSLVSWNCQGLGWSQDLTIPRLMEMRLSHFPEVLFLMETKNCSNVVVDLQEWLGYERVFT 60

Query: 222 VPPIHTAGGLCLLWKSGXXXXXXXXXXXXXXXXIKNDPHQSWIACFFYGSPYKTFRNTSW 43
           V PI  +GGL L WK G                I+   H+ +++C  YG+P  + ++  W
Sbjct: 61  VNPIGLSGGLALFWKKGVDIVIKYADKNLIDFQIQFGSHEFYVSC-VYGNPAFSDKHLVW 119

Query: 42  DPIRNLDL 19
           + I  + +
Sbjct: 120 EKITRIGI 127