BLASTX nr result
ID: Coptis23_contig00028772
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00028772 (295 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004164563.1| PREDICTED: mitochondrial ubiquitin ligase ac... 103 1e-20 ref|XP_004136066.1| PREDICTED: mitochondrial ubiquitin ligase ac... 103 1e-20 ref|XP_002321058.1| predicted protein [Populus trichocarpa] gi|2... 102 2e-20 gb|ABK95241.1| unknown [Populus trichocarpa] 102 2e-20 ref|XP_003591623.1| Baculoviral IAP repeat-containing protein [M... 101 6e-20 >ref|XP_004164563.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like [Cucumis sativus] Length = 337 Score = 103 bits (258), Expect = 1e-20 Identities = 50/77 (64%), Positives = 60/77 (77%) Frame = -1 Query: 295 MLGVTLIESLLPTGTALTVVGQAVKDDMGMIVIQRPQNGPYYVSRNSIDKLIENLGFQAR 116 MLGV IE +LPTGT+LTVVG+A KDD+G I IQRP GP+YVS +ID+LI NLG AR Sbjct: 162 MLGVKRIERVLPTGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWAR 221 Query: 115 WYKYVSMGLAVLALSLI 65 WYKY SMGL++ L L+ Sbjct: 222 WYKYASMGLSIFGLYLV 238 >ref|XP_004136066.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like [Cucumis sativus] Length = 342 Score = 103 bits (258), Expect = 1e-20 Identities = 50/77 (64%), Positives = 60/77 (77%) Frame = -1 Query: 295 MLGVTLIESLLPTGTALTVVGQAVKDDMGMIVIQRPQNGPYYVSRNSIDKLIENLGFQAR 116 MLGV IE +LPTGT+LTVVG+A KDD+G I IQRP GP+YVS +ID+LI NLG AR Sbjct: 162 MLGVKRIERVLPTGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWAR 221 Query: 115 WYKYVSMGLAVLALSLI 65 WYKY SMGL++ L L+ Sbjct: 222 WYKYASMGLSIFGLYLV 238 >ref|XP_002321058.1| predicted protein [Populus trichocarpa] gi|222861831|gb|EEE99373.1| predicted protein [Populus trichocarpa] Length = 335 Score = 102 bits (255), Expect = 2e-20 Identities = 51/77 (66%), Positives = 59/77 (76%) Frame = -1 Query: 295 MLGVTLIESLLPTGTALTVVGQAVKDDMGMIVIQRPQNGPYYVSRNSIDKLIENLGFQAR 116 MLGV IE +LPTGT+LTVVG+AVKDD+G + IQRP GP+YVS SID+LI NLG AR Sbjct: 160 MLGVKRIERVLPTGTSLTVVGEAVKDDIGTVRIQRPHKGPFYVSPKSIDELIGNLGKWAR 219 Query: 115 WYKYVSMGLAVLALSLI 65 WYKY S+GL V LI Sbjct: 220 WYKYASLGLTVFGAFLI 236 >gb|ABK95241.1| unknown [Populus trichocarpa] Length = 238 Score = 102 bits (255), Expect = 2e-20 Identities = 51/77 (66%), Positives = 59/77 (76%) Frame = -1 Query: 295 MLGVTLIESLLPTGTALTVVGQAVKDDMGMIVIQRPQNGPYYVSRNSIDKLIENLGFQAR 116 MLGV IE +LPTGT+LTVVG+AVKDD+G + IQRP GP+YVS SID+LI NLG AR Sbjct: 59 MLGVKRIERVLPTGTSLTVVGEAVKDDIGTVRIQRPHKGPFYVSPKSIDELIGNLGKWAR 118 Query: 115 WYKYVSMGLAVLALSLI 65 WYKY S+GL V LI Sbjct: 119 WYKYASLGLTVFGAFLI 135 >ref|XP_003591623.1| Baculoviral IAP repeat-containing protein [Medicago truncatula] gi|355480671|gb|AES61874.1| Baculoviral IAP repeat-containing protein [Medicago truncatula] Length = 344 Score = 101 bits (252), Expect = 6e-20 Identities = 53/87 (60%), Positives = 65/87 (74%) Frame = -1 Query: 295 MLGVTLIESLLPTGTALTVVGQAVKDDMGMIVIQRPQNGPYYVSRNSIDKLIENLGFQAR 116 MLGV IE +LP GT+LTVVG+A KDD+G I IQRP GP+YVS +ID+LI N+G AR Sbjct: 166 MLGVKRIERVLPVGTSLTVVGEAAKDDVGTIRIQRPSKGPFYVSPKTIDELIANIGRWAR 225 Query: 115 WYKYVSMGLAVLALSLIAAECAV*YII 35 WYKY S GL VL++ +IA AV YI+ Sbjct: 226 WYKYASAGLTVLSVYMIANH-AVRYIL 251