BLASTX nr result
ID: Coptis23_contig00028763
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00028763
(730 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002299211.1| predicted protein [Populus trichocarpa] gi|2... 289 5e-76
ref|XP_002513070.1| DNA binding protein, putative [Ricinus commu... 288 8e-76
emb|CBI40178.3| unnamed protein product [Vitis vinifera] 288 1e-75
ref|XP_002270290.1| PREDICTED: probable ADP-ribosylation factor ... 288 1e-75
ref|XP_004166399.1| PREDICTED: probable ADP-ribosylation factor ... 285 9e-75
>ref|XP_002299211.1| predicted protein [Populus trichocarpa] gi|222846469|gb|EEE84016.1|
predicted protein [Populus trichocarpa]
Length = 358
Score = 289 bits (739), Expect = 5e-76
Identities = 145/209 (69%), Positives = 177/209 (84%)
Frame = +1
Query: 46 SLDKKNSEKQHTSNRIQGLGHAFRHSWRRTECXXXXXXXXXXXXXXGMVEFIGMIKINVV 225
S DKK EKQ T +RI G+AFR+SW R + GMVEFIG+IK+NVV
Sbjct: 155 SQDKKQYEKQATRHRI---GNAFRNSWGRKDSEHKHTKKSYSLA--GMVEFIGLIKVNVV 209
Query: 226 RGTSLAVRDVVTSDPYVILTLGNQSMKTRVIKSNLNPVWNERLMLSIPDPVPPLKLQVYD 405
+GT+LAVRDV+TSDPYVI++LG QS++TRVIK+NLNP+WNE LMLSIP+ +PPLK+ VYD
Sbjct: 210 KGTNLAVRDVMTSDPYVIISLGQQSVRTRVIKNNLNPIWNESLMLSIPEQIPPLKVLVYD 269
Query: 406 KDTFTTDDFMGDAEIDIQPLLSSAKAYENSTASESMQLGKWVASKDNTLVKDSLISLVDG 585
KDTFTTDDFMG+AEIDIQPL+++AKAYENST +ESMQLGKW+A ++NTLVKD +I+LVDG
Sbjct: 270 KDTFTTDDFMGEAEIDIQPLVAAAKAYENSTITESMQLGKWIAGQENTLVKDGIITLVDG 329
Query: 586 KVKQEIALRLQNVERGVLEIELECVPLSQ 672
KVKQEI+L+L+NVERGVLEIELECVPL+Q
Sbjct: 330 KVKQEISLKLKNVERGVLEIELECVPLTQ 358
>ref|XP_002513070.1| DNA binding protein, putative [Ricinus communis]
gi|223548081|gb|EEF49573.1| DNA binding protein,
putative [Ricinus communis]
Length = 382
Score = 288 bits (737), Expect = 8e-76
Identities = 147/210 (70%), Positives = 177/210 (84%)
Frame = +1
Query: 43 ASLDKKNSEKQHTSNRIQGLGHAFRHSWRRTECXXXXXXXXXXXXXXGMVEFIGMIKINV 222
+S +KK +KQ T +RI G+AFR+SW R + GMVEF+G+IK+NV
Sbjct: 178 SSQEKKQYDKQATRHRI---GNAFRNSWGRKDSENKQSKKSNSMA--GMVEFVGLIKVNV 232
Query: 223 VRGTSLAVRDVVTSDPYVILTLGNQSMKTRVIKSNLNPVWNERLMLSIPDPVPPLKLQVY 402
V+GT+LAVRDVVTSDPYVIL+LG+QS++TRVIK+NLNPVWNE LMLSIPD +P LK+ VY
Sbjct: 233 VKGTNLAVRDVVTSDPYVILSLGHQSVRTRVIKNNLNPVWNESLMLSIPDHIPALKVLVY 292
Query: 403 DKDTFTTDDFMGDAEIDIQPLLSSAKAYENSTASESMQLGKWVASKDNTLVKDSLISLVD 582
DKDTFTTDDFMG+AEIDIQPL+++AKAYE ST +E MQLGKWVASKDNTL+KD +I+L+D
Sbjct: 293 DKDTFTTDDFMGEAEIDIQPLVAAAKAYETSTINEPMQLGKWVASKDNTLLKDGIITLLD 352
Query: 583 GKVKQEIALRLQNVERGVLEIELECVPLSQ 672
GKVKQEI+LRLQNVERGVLEIELECVPL+Q
Sbjct: 353 GKVKQEISLRLQNVERGVLEIELECVPLTQ 382
>emb|CBI40178.3| unnamed protein product [Vitis vinifera]
Length = 414
Score = 288 bits (736), Expect = 1e-75
Identities = 143/207 (69%), Positives = 176/207 (85%)
Frame = +1
Query: 52 DKKNSEKQHTSNRIQGLGHAFRHSWRRTECXXXXXXXXXXXXXXGMVEFIGMIKINVVRG 231
+KK+ EKQ T++R+ GLG AFR+SWRR E GM+EF+G+IK+NVV+G
Sbjct: 210 EKKHYEKQTTTHRLHGLGLAFRNSWRRKE--PEHKPVKKSSSSAGMIEFVGLIKVNVVKG 267
Query: 232 TSLAVRDVVTSDPYVILTLGNQSMKTRVIKSNLNPVWNERLMLSIPDPVPPLKLQVYDKD 411
T+LAVRDV+TSDPYV+L LG QS+KTRVIK+NLNPVWNERLMLSIP+ +PPL++ VYDKD
Sbjct: 268 TNLAVRDVMTSDPYVLLALGQQSVKTRVIKNNLNPVWNERLMLSIPEQIPPLRVFVYDKD 327
Query: 412 TFTTDDFMGDAEIDIQPLLSSAKAYENSTASESMQLGKWVASKDNTLVKDSLISLVDGKV 591
TF+TDDFMG+AEIDIQPL+S+A A+ENST +E M+ GK VASK+NTLVKDS+ISL DGKV
Sbjct: 328 TFSTDDFMGEAEIDIQPLVSAAIAHENSTLNEPMEFGKLVASKENTLVKDSVISLTDGKV 387
Query: 592 KQEIALRLQNVERGVLEIELECVPLSQ 672
Q+++L+LQNVERGVLEIELECVPLSQ
Sbjct: 388 MQDVSLKLQNVERGVLEIELECVPLSQ 414
>ref|XP_002270290.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
protein AGD11-like [Vitis vinifera]
Length = 376
Score = 288 bits (736), Expect = 1e-75
Identities = 143/207 (69%), Positives = 176/207 (85%)
Frame = +1
Query: 52 DKKNSEKQHTSNRIQGLGHAFRHSWRRTECXXXXXXXXXXXXXXGMVEFIGMIKINVVRG 231
+KK+ EKQ T++R+ GLG AFR+SWRR E GM+EF+G+IK+NVV+G
Sbjct: 172 EKKHYEKQTTTHRLHGLGLAFRNSWRRKE--PEHKPVKKSSSSAGMIEFVGLIKVNVVKG 229
Query: 232 TSLAVRDVVTSDPYVILTLGNQSMKTRVIKSNLNPVWNERLMLSIPDPVPPLKLQVYDKD 411
T+LAVRDV+TSDPYV+L LG QS+KTRVIK+NLNPVWNERLMLSIP+ +PPL++ VYDKD
Sbjct: 230 TNLAVRDVMTSDPYVLLALGQQSVKTRVIKNNLNPVWNERLMLSIPEQIPPLRVFVYDKD 289
Query: 412 TFTTDDFMGDAEIDIQPLLSSAKAYENSTASESMQLGKWVASKDNTLVKDSLISLVDGKV 591
TF+TDDFMG+AEIDIQPL+S+A A+ENST +E M+ GK VASK+NTLVKDS+ISL DGKV
Sbjct: 290 TFSTDDFMGEAEIDIQPLVSAAIAHENSTLNEPMEFGKLVASKENTLVKDSVISLTDGKV 349
Query: 592 KQEIALRLQNVERGVLEIELECVPLSQ 672
Q+++L+LQNVERGVLEIELECVPLSQ
Sbjct: 350 MQDVSLKLQNVERGVLEIELECVPLSQ 376
>ref|XP_004166399.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
protein AGD11-like [Cucumis sativus]
Length = 411
Score = 285 bits (728), Expect = 9e-75
Identities = 148/230 (64%), Positives = 183/230 (79%), Gaps = 6/230 (2%)
Frame = +1
Query: 1 SSSKWNTSCNTNLDASLDKKNSEKQHTSNRIQGLGHAFRHSWRRTECXXXXXXXXXXXXX 180
SSS +S +++ + S DK++ EKQ T +R+ GHAFR+S R +
Sbjct: 185 SSSCSQSSNSSSKNGSHDKRHYEKQATRHRV---GHAFRNSRGRRDGDHNHRNFERSSPP 241
Query: 181 X------GMVEFIGMIKINVVRGTSLAVRDVVTSDPYVILTLGNQSMKTRVIKSNLNPVW 342
GMVEF+G++K+NVV+G +LAVRDVVTSDPYVIL+LG+QS++TRVIK+NLNPVW
Sbjct: 242 VSRQASAGMVEFVGLVKVNVVKGRNLAVRDVVTSDPYVILSLGHQSVRTRVIKNNLNPVW 301
Query: 343 NERLMLSIPDPVPPLKLQVYDKDTFTTDDFMGDAEIDIQPLLSSAKAYENSTASESMQLG 522
NE LMLSIP+ +PPLK+ VYDKDTFTTDDFMG+AEIDIQPL+S+ KAYE ST ESMQLG
Sbjct: 302 NESLMLSIPEHIPPLKVLVYDKDTFTTDDFMGEAEIDIQPLVSATKAYEKSTIDESMQLG 361
Query: 523 KWVASKDNTLVKDSLISLVDGKVKQEIALRLQNVERGVLEIELECVPLSQ 672
KWVAS DNTLVKD +I+LVDGKV+Q+I+LRLQNVERGVLEIELEC+PL+Q
Sbjct: 362 KWVASNDNTLVKDGIINLVDGKVRQDISLRLQNVERGVLEIELECIPLTQ 411