BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028756
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38030.3| unnamed protein product [Vitis vinifera]               81   4e-13
ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot...    77   5e-12
ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot...    74   5e-11
emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]    74   5e-11
emb|CBI15777.3| unnamed protein product [Vitis vinifera]               71   3e-10

>emb|CBI38030.3| unnamed protein product [Vitis vinifera]
          Length = 856

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 40/96 (41%), Positives = 62/96 (64%)
 Frame = +2

Query: 683 SPFIRKFDQMSPTERNTSQRKRIKYSDDHWINGLHANSKYKRDKSLRDVIDYSDPFSVSN 862
           +P    F+    TE N+++ KRI   +++    +H+  K KR K+  +V+DYSDPF++ N
Sbjct: 14  NPIPVNFEPYKLTEFNSTKHKRIWTFEEN----MHSEPKQKRQKAGPNVVDYSDPFAIPN 69

Query: 863 MIGELDCGLYGSVSKEIEQLCMLRLHMLQPAFSLYP 970
           ++  LD G +GSV+KEIE LC  R+ MLQP + +YP
Sbjct: 70  LLEGLDAGRFGSVTKEIEALCARRMQMLQPYYVMYP 105


>ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 944

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 36/83 (43%), Positives = 57/83 (68%)
 Frame = +2

Query: 722 ERNTSQRKRIKYSDDHWINGLHANSKYKRDKSLRDVIDYSDPFSVSNMIGELDCGLYGSV 901
           E N+++ KRI+  D++    +H+  K KR K+  +V+DYSDPF++ N++  LD G +GS+
Sbjct: 25  EYNSTKDKRIRTFDEN----MHSEPKQKRQKAGSNVVDYSDPFAIPNLLEGLDAGKFGSM 80

Query: 902 SKEIEQLCMLRLHMLQPAFSLYP 970
           +KEIE LC  R+ ML P + +YP
Sbjct: 81  TKEIEALCARRMQMLHPYYVMYP 103


>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 903

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 32/63 (50%), Positives = 46/63 (73%)
 Frame = +2

Query: 782 LHANSKYKRDKSLRDVIDYSDPFSVSNMIGELDCGLYGSVSKEIEQLCMLRLHMLQPAFS 961
           +H+  K KR K+  +V+DYSDPF++ N++  LD G +GSV+KEIE LC  R+ MLQP + 
Sbjct: 1   MHSEPKQKRQKAGPNVVDYSDPFAIPNLLEGLDAGRFGSVTKEIEALCARRMQMLQPYYV 60

Query: 962 LYP 970
           +YP
Sbjct: 61  MYP 63


>emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]
          Length = 1187

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 32/63 (50%), Positives = 46/63 (73%)
 Frame = +2

Query: 782 LHANSKYKRDKSLRDVIDYSDPFSVSNMIGELDCGLYGSVSKEIEQLCMLRLHMLQPAFS 961
           +H+  K KR K+  +V+DYSDPF++ N++  LD G +GSV+KEIE LC  R+ MLQP + 
Sbjct: 1   MHSEPKQKRQKAGPNVVDYSDPFAIPNLLEGLDAGRFGSVTKEIEALCARRMQMLQPYYV 60

Query: 962 LYP 970
           +YP
Sbjct: 61  MYP 63


>emb|CBI15777.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 30/63 (47%), Positives = 45/63 (71%)
 Frame = +2

Query: 782 LHANSKYKRDKSLRDVIDYSDPFSVSNMIGELDCGLYGSVSKEIEQLCMLRLHMLQPAFS 961
           +H+  K KR K+  +V+DYSDPF++ N++  LD G +GS++KEIE LC  R+ ML P + 
Sbjct: 1   MHSEPKQKRQKAGSNVVDYSDPFAIPNLLEGLDAGKFGSMTKEIEALCARRMQMLHPYYV 60

Query: 962 LYP 970
           +YP
Sbjct: 61  MYP 63