BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028753
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]    91   2e-16
tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea m...    90   3e-16
ref|XP_002879150.1| pentatricopeptide repeat-containing protein ...    89   5e-16
ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi...    89   6e-16

>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 51/96 (53%), Positives = 59/96 (61%)
 Frame = +1

Query: 1   CRVHNNVELGEVVLEKINSFCSYGGGASVLLSNMYASGRQWCEVVDVREGMKEGNSKRRK 180
           CRVHNNV LGEV  EK+        G  +LLSN+YAS   W EV  VR+ MK  N   RK
Sbjct: 565 CRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMK--NKGLRK 622

Query: 181 PPGRSWIEVKGVVHEFLAGDKSHPRAMELFMVLEGL 288
            PG SWIEVK  VH  LAGDKSHP+  ++   L+ L
Sbjct: 623 NPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKL 658


>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 51/96 (53%), Positives = 59/96 (61%)
 Frame = +1

Query: 1   CRVHNNVELGEVVLEKINSFCSYGGGASVLLSNMYASGRQWCEVVDVREGMKEGNSKRRK 180
           CRVHNNV LGEV  EK+        G  +LLSN+YAS   W EV  VR+ MK  N   RK
Sbjct: 565 CRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMK--NKGLRK 622

Query: 181 PPGRSWIEVKGVVHEFLAGDKSHPRAMELFMVLEGL 288
            PG SWIEVK  VH  LAGDKSHP+  ++   L+ L
Sbjct: 623 NPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKL 658


>tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 42/96 (43%), Positives = 61/96 (63%)
 Frame = +1

Query: 1   CRVHNNVELGEVVLEKINSFCSYGGGASVLLSNMYASGRQWCEVVDVREGMKEGNSKRRK 180
           CR+H ++E  ++  EK+     Y  G+ VL+SNMYA+  +W +   +R  MKE   + RK
Sbjct: 541 CRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKE--RRVRK 598

Query: 181 PPGRSWIEVKGVVHEFLAGDKSHPRAMELFMVLEGL 288
            PG+SWI +K VVH F+A D SHPR+ E++  LE L
Sbjct: 599 QPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYLEKL 634


>ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324989|gb|EFH55409.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 872

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 49/98 (50%), Positives = 57/98 (58%)
 Frame = +1

Query: 1   CRVHNNVELGEVVLEKINSFCSYGGGASVLLSNMYASGRQWCEVVDVREGMKEGNSKRRK 180
           CRVH   ELG +  EKI +       A VLLSNMYA    W E   VR+ M E N K  K
Sbjct: 678 CRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVK--K 735

Query: 181 PPGRSWIEVKGVVHEFLAGDKSHPRAMELFMVLEGLRT 294
            PG SWIEVK   + FLAGD+SHP   +++M LE L T
Sbjct: 736 EPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLST 773


>ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
 Frame = +1

Query: 1   CRVHNNVELGEVVLEKINSFC--SYGGGASVLLSNMYASGRQWCEVVDVREGMKEGNSKR 174
           CR+H +V+LGE ++  I   C  S+GGG  VLLSN+YAS  QW  V  VR+ M +  S+ 
Sbjct: 469 CRIHGDVDLGERIINHIAELCPGSHGGGY-VLLSNLYASMGQWESVTKVRKAMSQRGSEG 527

Query: 175 RKPPGRSWIEVKGVVHEFLAGDKSHPRAMEL 267
              PG SWIE+ GVVHEFLA DK HPR  E+
Sbjct: 528 C--PGCSWIEIDGVVHEFLAADKLHPRISEI 556