BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028740
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    79   3e-13
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    79   4e-13
ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cuc...    64   2e-08
ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cuc...    64   2e-08
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    60   2e-07

>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
 Frame = +2

Query: 5   NLLREFFFVLPVKSILRFKSVSKHCLSLISDPYMVHSYNLRNSPPISGAFLHRTSILGNP 184
           +LL E F   PVK +LRF+SVSK  LSLISDP+  H +  R+S  + G  L     L N 
Sbjct: 37  DLLTEIFLRTPVKPLLRFRSVSKRWLSLISDPHFCHRHARRSSASVPGVLLG----LPNS 92

Query: 185 EFEFISLDSTTKS-APFKSLTFVNDPVGIKILQ 280
            F+FIS D    S  P +SL F+ DP+G+K+LQ
Sbjct: 93  NFDFISFDEKKASEPPLRSLDFIGDPLGVKVLQ 125


>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 47/94 (50%), Positives = 58/94 (61%)
 Frame = +2

Query: 2   DNLLREFFFVLPVKSILRFKSVSKHCLSLISDPYMVHSYNLRNSPPISGAFLHRTSILGN 181
           D+LL E    LP+KS+L+FKSVSKH LSLI+DP+     NL+ +P          S L  
Sbjct: 21  DDLLSELLLRLPIKSLLKFKSVSKHWLSLITDPHFSRRKNLKPNP---------VSAL-- 69

Query: 182 PEFEFISLDSTTKSAPFKSLTFVNDPVGIKILQS 283
             F F+ LD    SAPF SLTFV+ P GI+ILQS
Sbjct: 70  --FSFVPLDPLQTSAPFTSLTFVDHPRGIEILQS 101


>ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
 Frame = +2

Query: 2   DNLLREFFFVLPVKSILRFKSVSKHCLSLISDPYMVHSYNLRN--SPPISGAFLHRTSIL 175
           D+L  +    LP++S+LRFKSVSK  LSLIS+P   H   + +  +P  SG F  R +  
Sbjct: 20  DDLFFQILLRLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPSGIFFPRPT-P 78

Query: 176 GNPEFEFISLDSTTKSAPFKSLTFVNDPVGIKILQS 283
            +P F+FI+  +     PF+S  F +D  G  ILQS
Sbjct: 79  KSPPFDFINFTTNPSRPPFESPHFADDKHGFLILQS 114


>ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
 Frame = +2

Query: 2   DNLLREFFFVLPVKSILRFKSVSKHCLSLISDPYMVHSYNLRN--SPPISGAFLHRTSIL 175
           D+L  +    LP++S+LRFKSVSK  LSLIS+P   H   + +  +P  SG F  R +  
Sbjct: 20  DDLFFQILLRLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPSGIFFPRPT-P 78

Query: 176 GNPEFEFISLDSTTKSAPFKSLTFVNDPVGIKILQS 283
            +P F+FI+  +     PF+S  F +D  G  ILQS
Sbjct: 79  KSPPFDFINFTTNPSRPPFESPHFADDKHGFLILQS 114


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +2

Query: 2   DNLLREFFFVLPVKSILRFKSVSKHCLSLISDPYMVHSYNLRN-SPPISGAFLHRTSILG 178
           ++L+ +    LPVK +LRFKSVSK  LSLIS P+    + LRN +  IS  FL  + +  
Sbjct: 14  EDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLHTLRNPNHTISALFLRNSPL-- 71

Query: 179 NPEFEFISLDSTTKSAPFKSLTFVNDPV-GIKILQS 283
             EF+F+SL S++ S+   +     D   GIKILQS
Sbjct: 72  --EFKFLSLSSSSSSSSSSASPLSFDLFHGIKILQS 105