BLASTX nr result

ID: Coptis23_contig00028733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028733
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301078.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-47
ref|XP_002514001.1| conserved hypothetical protein [Ricinus comm...   176   2e-42
emb|CBI38223.3| unnamed protein product [Vitis vinifera]              167   2e-39
ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267...   167   2e-39
emb|CAN80154.1| hypothetical protein VITISV_038130 [Vitis vinifera]   167   2e-39

>ref|XP_002301078.1| predicted protein [Populus trichocarpa] gi|222842804|gb|EEE80351.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score =  192 bits (489), Expect = 3e-47
 Identities = 82/114 (71%), Positives = 96/114 (84%)
 Frame = -2

Query: 517 QVRAMSFTDIVASPHGAQLTNMLFMDRNSSVMEFFPNGWWEYAGIGKYAHHWMADYSGMK 338
           QVR M++TD+VASPHGAQLTNMLFMDRNSSVMEFFP GW E AG+G+YAHHWMAD SGM 
Sbjct: 269 QVRVMTYTDVVASPHGAQLTNMLFMDRNSSVMEFFPKGWLELAGVGQYAHHWMADQSGMN 328

Query: 337 HLGAWWDPQVEKECPHPDKESECFGIYKNGQVGHNETFFTEWARNAINQVKVMK 176
           H GAWWDP V+KECP P ++ +CF  YKNG+VGHNET F EWAR  ++QV++ K
Sbjct: 329 HRGAWWDPLVKKECPFPQQDLDCFNFYKNGKVGHNETHFAEWARIVLDQVRISK 382


>ref|XP_002514001.1| conserved hypothetical protein [Ricinus communis]
           gi|223547087|gb|EEF48584.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 479

 Score =  176 bits (447), Expect = 2e-42
 Identities = 81/134 (60%), Positives = 96/134 (71%), Gaps = 5/134 (3%)
 Frame = -2

Query: 517 QVRAMSFTDIVASPHGAQLTNMLFMDRNSSVMEFFPNGWWEYAGIGKYAHHWMADYSGMK 338
           QVR +++TDIVASPHGAQLTNMLFMDR SSVMEFFP GW E AGIG+YAHHWMAD SGM 
Sbjct: 346 QVRVLTYTDIVASPHGAQLTNMLFMDRKSSVMEFFPKGWLELAGIGQYAHHWMADQSGMI 405

Query: 337 HLGAWWDPQVEKECPHPDKESECFGIYKNGQVGHNETFFTEWARNAINQVKVMK----QD 170
           H G WW+P   KECP P+ + ECF  YK+G+VGHNET F  W    ++QV+  K    + 
Sbjct: 406 HQGTWWEPLSVKECPSPEHDLECFNFYKDGKVGHNETHFAAWTTTVLDQVRAKKLEINKS 465

Query: 169 EFSTQQPKS-SCVC 131
            F+  Q  S +C C
Sbjct: 466 SFNKSQLYSTACAC 479


>emb|CBI38223.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  167 bits (422), Expect = 2e-39
 Identities = 72/124 (58%), Positives = 94/124 (75%)
 Frame = -2

Query: 538 NNILVYIQVRAMSFTDIVASPHGAQLTNMLFMDRNSSVMEFFPNGWWEYAGIGKYAHHWM 359
           NN+    QV+ MS TDI+ SPHGAQLTNM  MDRNS+VMEFFP GW + AG+G+Y +HW+
Sbjct: 333 NNLTFCQQVKLMSLTDILVSPHGAQLTNMFLMDRNSNVMEFFPKGWLKLAGVGQYVYHWI 392

Query: 358 ADYSGMKHLGAWWDPQVEKECPHPDKESECFGIYKNGQVGHNETFFTEWARNAINQVKVM 179
           A +SGMKH GAW DP  + +CP+P+ +  C  IYKNG++G+N+TFF EWARN + +VK  
Sbjct: 393 ASWSGMKHEGAWRDPNGD-DCPYPEDDRRCMSIYKNGRIGYNDTFFEEWARNILVEVKTR 451

Query: 178 KQDE 167
           K +E
Sbjct: 452 KMEE 455


>ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267753 [Vitis vinifera]
          Length = 491

 Score =  167 bits (422), Expect = 2e-39
 Identities = 72/124 (58%), Positives = 94/124 (75%)
 Frame = -2

Query: 538 NNILVYIQVRAMSFTDIVASPHGAQLTNMLFMDRNSSVMEFFPNGWWEYAGIGKYAHHWM 359
           NN+    QV+ MS TDI+ SPHGAQLTNM  MDRNS+VMEFFP GW + AG+G+Y +HW+
Sbjct: 353 NNLTFCQQVKLMSLTDILVSPHGAQLTNMFLMDRNSNVMEFFPKGWLKLAGVGQYVYHWI 412

Query: 358 ADYSGMKHLGAWWDPQVEKECPHPDKESECFGIYKNGQVGHNETFFTEWARNAINQVKVM 179
           A +SGMKH GAW DP  + +CP+P+ +  C  IYKNG++G+N+TFF EWARN + +VK  
Sbjct: 413 ASWSGMKHEGAWRDPNGD-DCPYPEDDRRCMSIYKNGRIGYNDTFFEEWARNILVEVKTR 471

Query: 178 KQDE 167
           K +E
Sbjct: 472 KMEE 475


>emb|CAN80154.1| hypothetical protein VITISV_038130 [Vitis vinifera]
          Length = 489

 Score =  167 bits (422), Expect = 2e-39
 Identities = 72/124 (58%), Positives = 94/124 (75%)
 Frame = -2

Query: 538 NNILVYIQVRAMSFTDIVASPHGAQLTNMLFMDRNSSVMEFFPNGWWEYAGIGKYAHHWM 359
           NN+    QV+ MS TDI+ SPHGAQLTNM  MDRNS+VMEFFP GW + AG+G+Y +HW+
Sbjct: 351 NNLTFCQQVKLMSLTDILVSPHGAQLTNMFLMDRNSNVMEFFPKGWLKLAGVGQYVYHWI 410

Query: 358 ADYSGMKHLGAWWDPQVEKECPHPDKESECFGIYKNGQVGHNETFFTEWARNAINQVKVM 179
           A +SGMKH GAW DP  + +CP+P+ +  C  IYKNG++G+N+TFF EWARN + +VK  
Sbjct: 411 ASWSGMKHEGAWRDPNGD-DCPYPEDDRRCMSIYKNGRIGYNDTFFEEWARNILVEVKTR 469

Query: 178 KQDE 167
           K +E
Sbjct: 470 KMEE 473


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