BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028730
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32284.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated...    99   5e-19
emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera]    99   5e-19
ref|XP_004148880.1| PREDICTED: U3 small nucleolar RNA-associated...    84   9e-15
ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14

>emb|CBI32284.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/98 (48%), Positives = 65/98 (66%)
 Frame = +1

Query: 1   LTKTYPVQTRXXXXXXXXXXXXXXXYWRSYKSQEITNLIYPITSLSFSPTSPHNFITSIS 180
           L++T+PV+ +               YW S+KS  I NLI  ITSLSFSP +PH+F  + S
Sbjct: 8   LSRTFPVKPKLKAKSKKPSKTPESKYWSSFKSHTIPNLISSITSLSFSPATPHHFAAAYS 67

Query: 181 TSLTLYNTQTIEPISTFSSFNDIAYSPAFRSDGKLVAA 294
           TSLTL+N++T+EPIS+ SSF D+    +FRSDG L+AA
Sbjct: 68  TSLTLFNSKTLEPISSISSFKDVVSCASFRSDGLLIAA 105


>ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
           [Vitis vinifera]
          Length = 528

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/98 (48%), Positives = 65/98 (66%)
 Frame = +1

Query: 1   LTKTYPVQTRXXXXXXXXXXXXXXXYWRSYKSQEITNLIYPITSLSFSPTSPHNFITSIS 180
           L++T+PV+ +               YW S+KS  I NLI  ITSLSFSP +PH+F  + S
Sbjct: 8   LSRTFPVKPKLKAKSKKPSKTPESKYWSSFKSHTIPNLISSITSLSFSPATPHHFAAAYS 67

Query: 181 TSLTLYNTQTIEPISTFSSFNDIAYSPAFRSDGKLVAA 294
           TSLTL+N++T+EPIS+ SSF D+    +FRSDG L+AA
Sbjct: 68  TSLTLFNSKTLEPISSISSFKDVVSCASFRSDGLLIAA 105


>emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera]
          Length = 570

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/98 (48%), Positives = 65/98 (66%)
 Frame = +1

Query: 1   LTKTYPVQTRXXXXXXXXXXXXXXXYWRSYKSQEITNLIYPITSLSFSPTSPHNFITSIS 180
           L++T+PV+ +               YW S+KS  I NLI  ITSLSFSP +PH+F  + S
Sbjct: 8   LSRTFPVKPKLKAKSKKPSKTPESKYWSSFKSHTIPNLISSITSLSFSPATPHHFAAAYS 67

Query: 181 TSLTLYNTQTIEPISTFSSFNDIAYSPAFRSDGKLVAA 294
           TSLTL+N++T+EPIS+ SSF D+    +FRSDG L+AA
Sbjct: 68  TSLTLFNSKTLEPISSISSFKDVVSCASFRSDGLLIAA 105


>ref|XP_004148880.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
           [Cucumis sativus] gi|449528790|ref|XP_004171386.1|
           PREDICTED: U3 small nucleolar RNA-associated protein 15
           homolog [Cucumis sativus]
          Length = 528

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/98 (41%), Positives = 59/98 (60%)
 Frame = +1

Query: 1   LTKTYPVQTRXXXXXXXXXXXXXXXYWRSYKSQEITNLIYPITSLSFSPTSPHNFITSIS 180
           LT+T+PV+ +               YW S+K  EI NL+  ++S++FSPT+P  F  + S
Sbjct: 9   LTRTFPVKPKLKSKPRTPKQTPESKYWSSFKRHEIPNLLSSVSSIAFSPTNPSIFCATHS 68

Query: 181 TSLTLYNTQTIEPISTFSSFNDIAYSPAFRSDGKLVAA 294
            SLTL++ QT+ P ST SSF D+    +FR DG L+AA
Sbjct: 69  ASLTLFSAQTMAPTSTISSFRDVVSCASFRCDGLLIAA 106


>ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|222843286|gb|EEE80833.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/98 (42%), Positives = 60/98 (61%)
 Frame = +1

Query: 1   LTKTYPVQTRXXXXXXXXXXXXXXXYWRSYKSQEITNLIYPITSLSFSPTSPHNFITSIS 180
           ++KT+P + +               YW S+KS +I+NLI  I S+ FSP SPH F  + S
Sbjct: 14  ISKTFPTKPKLKPKAKTPSKTPESKYWSSFKSHQISNLISSIPSIDFSPISPHQFAAANS 73

Query: 181 TSLTLYNTQTIEPISTFSSFNDIAYSPAFRSDGKLVAA 294
            SLTL+++QT+ P ST  SF+D+  S +FR DG L+AA
Sbjct: 74  ASLTLFSSQTLSPTSTI-SFSDVVTSCSFRCDGSLIAA 110