BLASTX nr result

ID: Coptis23_contig00028722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028722
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   129   9e-28
ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [S...   122   8e-26
emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga...   122   1e-25
ref|XP_002445703.1| hypothetical protein SORBIDRAFT_07g024435 [S...   117   3e-24
ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [S...   116   6e-24

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  129 bits (323), Expect = 9e-28
 Identities = 61/161 (37%), Positives = 90/161 (55%)
 Frame = -1

Query: 545 GDLNIIFDQNEKQGGELFELQQSEFAADFIQQEGLIDLGYSGNSFTWTNGREGRANVKQR 366
           GD+N +   NEK GG     +Q +   D+I    L+DLG+ G  FTWTNGR G + +K+R
Sbjct: 138 GDMNEVLHGNEKMGGRQVGKEQGKQCKDWIAANALLDLGFQGPKFTWTNGRTGGSLIKER 197

Query: 365 LDRGLANTDWFILFPEFKLFHLPRIESDHSPIMLHLNPNTNKAPKPFRFQAMWINHESYL 186
           LDR L N++W  LFP+ K+ HLPR  SDH P+++  N N      PFR + +W  H  + 
Sbjct: 198 LDRALVNSEWLDLFPDTKVIHLPRTFSDHCPLLILFNENPRSESFPFRCKEVWAYHPDFT 257

Query: 185 PLINQAWANSESRNKIFEVKDKLHNTKTALKEWNKNVFGDV 63
            +I + W +    N     +D      +++K W+K VFG +
Sbjct: 258 NVIEETWGS--HHNSYVAARDLF---LSSVKSWSKYVFGSI 293


>ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [Sorghum bicolor]
           gi|241916322|gb|EER89466.1| hypothetical protein
           SORBIDRAFT_10g007985 [Sorghum bicolor]
          Length = 649

 Score =  122 bits (306), Expect = 8e-26
 Identities = 67/199 (33%), Positives = 112/199 (56%), Gaps = 3/199 (1%)
 Frame = -1

Query: 596 IKFMSKVT*TPK*QLNIGDLNIIFDQNEKQGGELFELQQSEFAADFIQQEGLIDLGYSGN 417
           +KF++  +  P   L  GD N + + +E+ GG+    +Q +   + +Q  GL+DLG+ G 
Sbjct: 387 LKFLNTQSELP--WLCTGDFNEVLEAHEQFGGQSRSERQMDGFREAVQVCGLMDLGFIGL 444

Query: 416 SFTWTNGREGRANVKQRLDRGLANTDWFILFPEFKLFHLPRIESDHSPIML---HLNPNT 246
            +TW N +EG  NVK RLDRGLAN  +  LF + K++H+   ESDH  ++L      P+ 
Sbjct: 445 PYTWDNRQEGINNVKVRLDRGLANPAFLDLFRDTKVWHVQTTESDHCCLLLECFRAKPSG 504

Query: 245 NKAPKPFRFQAMWINHESYLPLINQAWANSESRNKIFEVKDKLHNTKTALKEWNKNVFGD 66
            +A + FR++ MW    SY   +  AW   + +  + +V ++L     +L +W++  FG 
Sbjct: 505 RRARRRFRYENMWRRDPSYTLAVESAWQEPDDQASMSQVANRLGELGRSLSDWDQTTFGS 564

Query: 65  VRKNIADTTKAIDNIQVKS 9
           VRKN+A   K ++ I+ +S
Sbjct: 565 VRKNLAKLRKDLERIRGRS 583


>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score =  122 bits (305), Expect = 1e-25
 Identities = 72/181 (39%), Positives = 99/181 (54%), Gaps = 3/181 (1%)
 Frame = -1

Query: 554 LNIGDLNIIFDQNEKQGGELFELQQSEFAADFIQQEGLIDLGYSGNSFTWTNGREGRANV 375
           L +GD N +   +E+  G L   +  E   +FIQ  GLID+  +   FTW +G     N 
Sbjct: 137 LIMGDFNEVLSSSERGSG-LSSQEGVEDFRNFIQSLGLIDISSANGRFTWFHG-----NR 190

Query: 374 KQRLDRGLANTDWFILFPEFKLFHLPRIESDHSPIMLHLNPNTNKAPKPFRFQAMWINHE 195
           K RLDR L  +DW   +P   L  L R  SDH PI+ H +P TN  PKPFRF   W++H 
Sbjct: 191 KSRLDRCLVTSDWIQQYPNLSLQILNRTVSDHCPILAH-SPATNWGPKPFRFLNCWVSHP 249

Query: 194 SYLPLINQAWANSESRNKIFEVKDKLHNTKTALKEWNKNVFGDVR---KNIADTTKAIDN 24
           ++LP I+ AWAN+++      + DKL   K  LKEWNK+ FG +    K + D  +  D+
Sbjct: 250 NFLPTISLAWANAQN----LPLPDKLKQLKLKLKEWNKSEFGAIDTKIKELEDLIQHFDD 305

Query: 23  I 21
           I
Sbjct: 306 I 306


>ref|XP_002445703.1| hypothetical protein SORBIDRAFT_07g024435 [Sorghum bicolor]
            gi|241942053|gb|EES15198.1| hypothetical protein
            SORBIDRAFT_07g024435 [Sorghum bicolor]
          Length = 785

 Score =  117 bits (292), Expect = 3e-24
 Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 3/199 (1%)
 Frame = -1

Query: 596  IKFMSKVT*TPK*QLNIGDLNIIFDQNEKQGGELFELQQSEFAADFIQQEGLIDLGYSGN 417
            +KF++  +  P   L  GD N + + +E+ GGE             +Q  GL+DLG+ G 
Sbjct: 474  LKFLNTQSELP--WLCAGDFNEVLEAHEQFGGEA------------VQVCGLMDLGFIGL 519

Query: 416  SFTWTNGREGRANVKQRLDRGLANTDWFILFPEFKLFHLPRIESDHSPIML---HLNPNT 246
             +TW N +EG  NVK RLDRGLAN  +  LF + K++H+   ESDH  ++L      P+ 
Sbjct: 520  PYTWDNRQEGSNNVKVRLDRGLANPAFLDLFRDTKVWHVQTTESDHCCLLLECFRAKPSG 579

Query: 245  NKAPKPFRFQAMWINHESYLPLINQAWANSESRNKIFEVKDKLHNTKTALKEWNKNVFGD 66
             +A + FR++ MW    SY   +  AW   + +  + +V ++L     ++ +W++  FG 
Sbjct: 580  RRARRRFRYENMWRRDPSYTLAVESAWQEPDDQASMSQVANRLGELDRSISDWDQTTFGS 639

Query: 65   VRKNIADTTKAIDNIQVKS 9
            VRKN+A   K ++ I+ +S
Sbjct: 640  VRKNLAKLRKDLERIRGQS 658


>ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor]
           gi|241921088|gb|EER94232.1| hypothetical protein
           SORBIDRAFT_01g021750 [Sorghum bicolor]
          Length = 426

 Score =  116 bits (290), Expect = 6e-24
 Identities = 59/154 (38%), Positives = 88/154 (57%)
 Frame = -1

Query: 548 IGDLNIIFDQNEKQGGELFELQQSEFAADFIQQEGLIDLGYSGNSFTWTNGREGRANVKQ 369
           +GDLN I   +EK G    +L++     D +++ G IDLGYSG ++TWTN R       +
Sbjct: 140 MGDLNNIMHPDEKSGPGRPDLRRINSFCDSVKECGFIDLGYSGPAYTWTNKRFSTTPTFE 199

Query: 368 RLDRGLANTDWFILFPEFKLFHLPRIESDHSPIMLHLNPNTNKAPKPFRFQAMWINHESY 189
           RLDR LAN +W +++P   ++HLP + SDH+PI+  L+ NT    KPFRF+  W+  + Y
Sbjct: 200 RLDRCLANAEWCMMYPRTTVYHLPMLRSDHTPILALLDSNTYNNTKPFRFENWWLMEQDY 259

Query: 188 LPLINQAWANSESRNKIFEVKDKLHNTKTALKEW 87
                ++W    S N++F  K K       LK+W
Sbjct: 260 EETAKKSW--QRSTNRLFHQKTKY--LAVDLKKW 289


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