BLASTX nr result

ID: Coptis23_contig00028706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028706
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37492.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002528529.1| auxin:hydrogen symporter, putative [Ricinus ...    82   3e-14
ref|XP_003547889.1| PREDICTED: uncharacterized protein LOC100817...    69   3e-10
ref|XP_002336602.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002263495.2| PREDICTED: uncharacterized protein LOC100260...    64   1e-08

>emb|CBI37492.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/108 (38%), Positives = 62/108 (57%)
 Frame = -2

Query: 327 AVYLWSYVYNILRVYSSQKANETEVKGYINGAENSEVTSEFFSESCKEALLPSSDLSVDK 148
           A+ +WSYVY I+R+ +++   E  +         S  T E  SE C EALLPS D    +
Sbjct: 156 AIGIWSYVYTIMRISANKCKKEINLDDSTISIRTSGETLEILSEGCTEALLPSKDCPSSR 215

Query: 147 ESQYRIAISYATPRENEKVPIFVKFKQNLKMLDERFNLKKLFAPSTIG 4
           E    + +++A     +KVP   K KQ +++L E+ +LKK+FAPSTIG
Sbjct: 216 ECSDEVELAHAGSEGKQKVPFLEKIKQQVEILMEKIDLKKVFAPSTIG 263


>ref|XP_002528529.1| auxin:hydrogen symporter, putative [Ricinus communis]
           gi|223532031|gb|EEF33841.1| auxin:hydrogen symporter,
           putative [Ricinus communis]
          Length = 447

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/109 (40%), Positives = 65/109 (59%)
 Frame = -2

Query: 327 AVYLWSYVYNILRVYSSQKANETEVKGYINGAENSEVTSEFFSESCKEALLPSSDLSVDK 148
           ++Y+WSYVYNI+R+YS++    T++     GA++S  T +  S  C   LLP  + S D+
Sbjct: 157 SIYMWSYVYNIVRLYSNKDCGGTKLDAITKGAKSSGETPKNLSRCCTGPLLPLENSSRDE 216

Query: 147 ESQYRIAISYATPRENEKVPIFVKFKQNLKMLDERFNLKKLFAPSTIGA 1
           E      +     +E E+V I  + KQ L+M+ E F LK+LFAPST GA
Sbjct: 217 EHMDCFELECTLSKEKEEVSILDRIKQGLQMVTE-FKLKRLFAPSTTGA 264


>ref|XP_003547889.1| PREDICTED: uncharacterized protein LOC100817605 [Glycine max]
          Length = 417

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
 Frame = -2

Query: 327 AVYLWSYVYNILRVYSSQKANETEVKGYINGAENSEVTSEFFSESCKEALLPSSDLSVDK 148
           AV++WSYVYNI+R+ SS+   E      IN  + S   SE  +++  E L P+ D + D 
Sbjct: 157 AVFIWSYVYNIMRISSSRIQKEDNTGNGINILKASAEASESRTDNFSETLNPTKDATDD- 215

Query: 147 ESQYRIAISYATPRENEK-VPIFVKFKQNLKMLDERFNLKKLFAPSTIGA 1
              Y + + +A P E  + V I  K K +L ++    N K +FAPST+GA
Sbjct: 216 --AYTLLLPHAKPEEKVRLVSISRKIKHHLGVISSNLNFKAMFAPSTLGA 263


>ref|XP_002336602.1| predicted protein [Populus trichocarpa] gi|222836291|gb|EEE74712.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
 Frame = -2

Query: 327 AVYLWSYVYNILRVYSSQK-ANETEVKGYINGAENSEVTSEFFSESCKEALLPSSDLSVD 151
           ++YLWSYVY+I+RVYSS K ++E ++     G E++  T+E   +     LLP  + S++
Sbjct: 51  SIYLWSYVYHIVRVYSSSKDSDEPKLDELPEGTESAGETTENLPKCRTGPLLPLKEPSLE 110

Query: 150 KESQYRIAISYATPRENEKVPIFVKFKQNLKMLDERFNLKKLFAPSTIGA 1
           +    R+ +    P+E  K P     KQ  + + ++ NL++LF+P   GA
Sbjct: 111 EGHMERLELDCVVPQEKAKEPFPSNVKQGFQKVIKKLNLRRLFSPIINGA 160


>ref|XP_002263495.2| PREDICTED: uncharacterized protein LOC100260227 [Vitis vinifera]
          Length = 387

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 43/109 (39%), Positives = 57/109 (52%)
 Frame = -2

Query: 327 AVYLWSYVYNILRVYSSQKANETEVKGYINGAENSEVTSEFFSESCKEALLPSSDLSVDK 148
           A+YLWSYVYNI+RV S      TEV   IN  ++S           +E LL S D S+  
Sbjct: 132 AIYLWSYVYNIVRVSS---VGTTEV---INIEDDSPA-------KMREPLLDSKDCSISV 178

Query: 147 ESQYRIAISYATPRENEKVPIFVKFKQNLKMLDERFNLKKLFAPSTIGA 1
           +   ++ + Y    EN KV    K K+ L+ML    N++ L APST GA
Sbjct: 179 DYADQLTLPYTQSEENLKVTTADKVKRFLRMLSREINIQALLAPSTTGA 227


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