BLASTX nr result

ID: Coptis23_contig00028703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028703
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634876.1| PREDICTED: exportin-7-like [Vitis vinifera] ...   153   1e-41
ref|XP_002303964.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-39
ref|XP_002299168.1| predicted protein [Populus trichocarpa] gi|2...   146   6e-39
ref|XP_002525573.1| Exportin-7, putative [Ricinus communis] gi|2...   143   2e-38
ref|XP_004146773.1| PREDICTED: LOW QUALITY PROTEIN: exportin-7-l...   139   2e-37

>ref|XP_003634876.1| PREDICTED: exportin-7-like [Vitis vinifera]
           gi|298205126|emb|CBI40647.3| unnamed protein product
           [Vitis vinifera]
          Length = 1052

 Score =  153 bits (387), Expect(2) = 1e-41
 Identities = 79/97 (81%), Positives = 82/97 (84%)
 Frame = -3

Query: 293 LKKFYKQGKLSELVNVAGYSDWIHLVAELT*KSPQS*QWASSSVYYFLGLWSRLVTSVPY 114
           L +F    +LSELVNV GYSDWIHLVAE T KS QS QWASSSVYY LGLWSRLVTSVPY
Sbjct: 320 LGRFRVNYQLSELVNVDGYSDWIHLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPY 379

Query: 113 LKGDTPSLLDEFVPKITEGFIISRFDSVQAEFSDDVS 3
           LKGD PSLLDEFVPKITEGFI SRFDSVQA F DD+S
Sbjct: 380 LKGDAPSLLDEFVPKITEGFITSRFDSVQAGFPDDLS 416



 Score = 41.2 bits (95), Expect(2) = 1e-41
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = -2

Query: 324 SKFLAHLMTGTKEILQTGQ 268
           SKFLAHLMTGTKEILQTGQ
Sbjct: 287 SKFLAHLMTGTKEILQTGQ 305


>ref|XP_002303964.1| predicted protein [Populus trichocarpa] gi|222841396|gb|EEE78943.1|
           predicted protein [Populus trichocarpa]
          Length = 1049

 Score =  146 bits (368), Expect(2) = 2e-39
 Identities = 75/95 (78%), Positives = 80/95 (84%)
 Frame = -3

Query: 293 LKKFYKQGKLSELVNVAGYSDWIHLVAELT*KSPQS*QWASSSVYYFLGLWSRLVTSVPY 114
           L +F    +LSELVNV GYSDWI LVAE T KS QS QWASSSVYY LGLWSRLVTSVPY
Sbjct: 319 LGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPY 378

Query: 113 LKGDTPSLLDEFVPKITEGFIISRFDSVQAEFSDD 9
           LKG+ PSLLDEFVPKITEGFI SRF+SVQA F+DD
Sbjct: 379 LKGEAPSLLDEFVPKITEGFITSRFNSVQAGFADD 413



 Score = 41.2 bits (95), Expect(2) = 2e-39
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = -2

Query: 324 SKFLAHLMTGTKEILQTGQ 268
           SKFLAHLMTGTKEILQTGQ
Sbjct: 286 SKFLAHLMTGTKEILQTGQ 304


>ref|XP_002299168.1| predicted protein [Populus trichocarpa] gi|222846426|gb|EEE83973.1|
           predicted protein [Populus trichocarpa]
          Length = 1049

 Score =  146 bits (368), Expect(2) = 6e-39
 Identities = 75/95 (78%), Positives = 80/95 (84%)
 Frame = -3

Query: 293 LKKFYKQGKLSELVNVAGYSDWIHLVAELT*KSPQS*QWASSSVYYFLGLWSRLVTSVPY 114
           L +F    +LSELVNV GYSDWI LVAE T KS QS QWASSSVYY LGLWSRLVTSVPY
Sbjct: 319 LGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPY 378

Query: 113 LKGDTPSLLDEFVPKITEGFIISRFDSVQAEFSDD 9
           LKG+ PSLLDEFVPKITEGFI SRF+SVQA F+DD
Sbjct: 379 LKGEAPSLLDEFVPKITEGFITSRFNSVQAGFTDD 413



 Score = 39.7 bits (91), Expect(2) = 6e-39
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = -2

Query: 324 SKFLAHLMTGTKEILQTGQ 268
           SKFLAHLMTGTKEILQTG+
Sbjct: 286 SKFLAHLMTGTKEILQTGR 304


>ref|XP_002525573.1| Exportin-7, putative [Ricinus communis] gi|223535152|gb|EEF36832.1|
           Exportin-7, putative [Ricinus communis]
          Length = 1089

 Score =  143 bits (360), Expect(2) = 2e-38
 Identities = 73/97 (75%), Positives = 79/97 (81%)
 Frame = -3

Query: 293 LKKFYKQGKLSELVNVAGYSDWIHLVAELT*KSPQS*QWASSSVYYFLGLWSRLVTSVPY 114
           L +F    +LSELVNV GY DWI LVAE T  S QS QWASSSVYY LGLWS+LVTSVPY
Sbjct: 320 LGRFRVNYQLSELVNVEGYGDWIQLVAEFTLTSLQSWQWASSSVYYLLGLWSKLVTSVPY 379

Query: 113 LKGDTPSLLDEFVPKITEGFIISRFDSVQAEFSDDVS 3
           LKGD PS+LDEFVPKITEGFI SRF+SVQA F DD+S
Sbjct: 380 LKGDAPSMLDEFVPKITEGFITSRFNSVQAGFPDDLS 416



 Score = 41.2 bits (95), Expect(2) = 2e-38
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = -2

Query: 324 SKFLAHLMTGTKEILQTGQ 268
           SKFLAHLMTGTKEILQTGQ
Sbjct: 287 SKFLAHLMTGTKEILQTGQ 305


>ref|XP_004146773.1| PREDICTED: LOW QUALITY PROTEIN: exportin-7-like [Cucumis sativus]
          Length = 1061

 Score =  139 bits (351), Expect(2) = 2e-37
 Identities = 72/97 (74%), Positives = 77/97 (79%)
 Frame = -3

Query: 293 LKKFYKQGKLSELVNVAGYSDWIHLVAELT*KSPQS*QWASSSVYYFLGLWSRLVTSVPY 114
           L +F    +L+ELVNV GYSDWI LVAE T KS  S QWASSSVYY LGLWSRLV SVPY
Sbjct: 330 LGRFRVNYQLTELVNVEGYSDWIRLVAEFTLKSLHSWQWASSSVYYLLGLWSRLVASVPY 389

Query: 113 LKGDTPSLLDEFVPKITEGFIISRFDSVQAEFSDDVS 3
           LKGD PSLLDEFVPKITEGFI SR +SVQA   DD+S
Sbjct: 390 LKGDAPSLLDEFVPKITEGFITSRLNSVQAGLQDDLS 426



 Score = 41.2 bits (95), Expect(2) = 2e-37
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = -2

Query: 324 SKFLAHLMTGTKEILQTGQ 268
           SKFLAHLMTGTKEILQTGQ
Sbjct: 295 SKFLAHLMTGTKEILQTGQ 313


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