BLASTX nr result

ID: Coptis23_contig00028695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028695
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523293.1| ATP synthase delta chain, putative [Ricinus ...   169   6e-40
ref|XP_002320885.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35
gb|AFK44768.1| unknown [Lotus japonicus]                              145   9e-33
ref|NP_001235001.1| uncharacterized protein LOC100526851 [Glycin...   140   2e-31
ref|XP_004134294.1| PREDICTED: ATP synthase delta chain, chlorop...   139   8e-31

>ref|XP_002523293.1| ATP synthase delta chain, putative [Ricinus communis]
           gi|223537381|gb|EEF39009.1| ATP synthase delta chain,
           putative [Ricinus communis]
          Length = 227

 Score =  169 bits (428), Expect = 6e-40
 Identities = 98/220 (44%), Positives = 136/220 (61%)
 Frame = -1

Query: 735 STPREFNLFKPPNPNHVLPPDHSHLYNNKSNTFFNRPTSFFPNKAPVFTSPFNYTTPISS 556
           S PR+F  FK P+ +  LPP H   +  K N+  NR T+         T+  ++  P   
Sbjct: 18  SKPRQFYHFKTPSASQQLPPTH---FTTKPNSISNRNTNIQILSLKSLTNSPSFLKPP-- 72

Query: 555 LKAALPIVNRKATSGYAAALLDIARCDNTLDIVDKDVRRLSRLLHNADIRAIMVNPLINA 376
                P  ++   +GYAAALLDIA+ +N+L+ V+KDV+RLS+LL N  I+ I++NPL+  
Sbjct: 73  -----PNTHQNPATGYAAALLDIAQFNNSLETVEKDVKRLSKLLRNEQIQCILINPLVGD 127

Query: 375 NXXXXXXXXXXXRGKFQRHLVVVLKMLVGKNKVEMVTEVLEDFLRIYDELNGTRVVLVSC 196
                       +GKF   LV +L ML+ +NK+ +V EVL +F RI+DEL+GT+VVLVS 
Sbjct: 128 KEKGLVLKEVGKKGKFNSILVRLLTMLIERNKIMIVNEVLVEFQRIFDELSGTKVVLVSS 187

Query: 195 AKNMEEDKLFGIAKKVQRMSGAMKVKVRNLIREGSPSFAL 76
            K MEED LF IA+ VQ+ SGA+KVKVRNL+ E  PS A+
Sbjct: 188 KKKMEEDALFRIAQSVQKFSGAVKVKVRNLVDEKLPSSAV 227


>ref|XP_002320885.1| predicted protein [Populus trichocarpa] gi|222861658|gb|EEE99200.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  154 bits (389), Expect = 2e-35
 Identities = 95/227 (41%), Positives = 131/227 (57%), Gaps = 9/227 (3%)
 Frame = -1

Query: 735 STPREFNLFKPPNPNHVLPPDHSHLYNNKSNTFFNRPTSFFPNKAPVFTSPF---NYTTP 565
           ST  E    + P+ +H LPP+ +            +PTS   N+ P  T      N   P
Sbjct: 58  STLPELQHLRTPHVSHQLPPNLT-----------TKPTSSISNRTPSKTKTLSFKNLNLP 106

Query: 564 I------SSLKAALPIVNRKATSGYAAALLDIARCDNTLDIVDKDVRRLSRLLHNADIRA 403
           +      SS   + P  +R   SGYAAAL+DIARC ++LDIV  DV++L +LL N  I+A
Sbjct: 107 LFSNISQSSSHNSSPHSHRNPVSGYAAALVDIARCKSSLDIVQNDVQKLLKLLQNEQIQA 166

Query: 402 IMVNPLINANXXXXXXXXXXXRGKFQRHLVVVLKMLVGKNKVEMVTEVLEDFLRIYDELN 223
           ++ +P +              RGKF R+LV ++KML+ +NKV +V++VL +F  I DEL+
Sbjct: 167 VLGSPFVGDKEKGQVVKEVAKRGKFNRYLVGLVKMLIDRNKVMIVSDVLMEFESICDELS 226

Query: 222 GTRVVLVSCAKNMEEDKLFGIAKKVQRMSGAMKVKVRNLIREGSPSF 82
           GTRVVLV   K MEED+LF IAK VQ ++GAM VKV+N   E  P+F
Sbjct: 227 GTRVVLVPSPKKMEEDQLFWIAKTVQNLTGAMNVKVKNFFDEKFPAF 273


>gb|AFK44768.1| unknown [Lotus japonicus]
          Length = 240

 Score =  145 bits (366), Expect = 9e-33
 Identities = 86/221 (38%), Positives = 128/221 (57%), Gaps = 2/221 (0%)
 Frame = -1

Query: 732 TPREFNLF-KPPNPNHVLPPDHSHLYNNKSNTFFNRPTSFFPNKAPVFTSPFNYTTPISS 556
           T REF  F + P      PP H        +    +  +   +K+    +P +  TP   
Sbjct: 20  TNREFYYFTRTPYAPPTRPPQHHVSSAPTVHNLIPKIKTLSHHKSSSSLAPSSSNTPPPK 79

Query: 555 LKAALPIV-NRKATSGYAAALLDIARCDNTLDIVDKDVRRLSRLLHNADIRAIMVNPLIN 379
           +K + PI+ +R   +GYAAA++D+A+  N+L  V +DV+RL +LL   +  + + +P   
Sbjct: 80  IKPSPPIIFHRNPATGYAAAVIDVAQSTNSLHSVQRDVQRLLKLLQTVNFESFVADPSRI 139

Query: 378 ANXXXXXXXXXXXRGKFQRHLVVVLKMLVGKNKVEMVTEVLEDFLRIYDELNGTRVVLVS 199
                        +G F RH+V +LKML+ KNK+ +V +VL++F RIYDEL GT+VVLVS
Sbjct: 140 EEVRRQALKRVLEKGNFHRHVVTILKMLLKKNKLGIVQQVLQEFERIYDELCGTQVVLVS 199

Query: 198 CAKNMEEDKLFGIAKKVQRMSGAMKVKVRNLIREGSPSFAL 76
             K M ED+L GI K VQ+MSGA++VKV+NL+ E   SFA+
Sbjct: 200 SEKKMGEDELLGIVKSVQQMSGAVRVKVKNLVPESLASFAV 240


>ref|NP_001235001.1| uncharacterized protein LOC100526851 [Glycine max]
           gi|255630986|gb|ACU15857.1| unknown [Glycine max]
          Length = 218

 Score =  140 bits (354), Expect = 2e-31
 Identities = 87/219 (39%), Positives = 126/219 (57%)
 Frame = -1

Query: 732 TPREFNLFKPPNPNHVLPPDHSHLYNNKSNTFFNRPTSFFPNKAPVFTSPFNYTTPISSL 553
           T R+F  FK  +P         H+++  +  F  +  +F    +P  + PF+  +P+   
Sbjct: 22  TNRDFYRFKA-SPTRSQQQQQHHVFSTSTPNFLPKTKTFSHKSSP--SLPFS-PSPLKP- 76

Query: 552 KAALPIVNRKATSGYAAALLDIARCDNTLDIVDKDVRRLSRLLHNADIRAIMVNPLINAN 373
           K + P  +    +GYAAAL+D+A   N+L  V  DV+RL +LL  A  ++  V       
Sbjct: 77  KPSSPTFHPNPATGYAAALVDVAHNSNSLHFVHSDVQRLLKLLQGAKFQSPAVEQ----- 131

Query: 372 XXXXXXXXXXXRGKFQRHLVVVLKMLVGKNKVEMVTEVLEDFLRIYDELNGTRVVLVSCA 193
                       G F RH+V +LKML+ KNKV +V EVL++F RIYD L GT++VLVS  
Sbjct: 132 ------------GNFHRHVVALLKMLLKKNKVGVVKEVLQEFERIYDRLCGTQMVLVSSK 179

Query: 192 KNMEEDKLFGIAKKVQRMSGAMKVKVRNLIREGSPSFAL 76
             M ED+LFGIAK V ++SGA++VKVRNL++E  PSFA+
Sbjct: 180 TKMREDQLFGIAKSVHQLSGAVRVKVRNLVQESMPSFAM 218


>ref|XP_004134294.1| PREDICTED: ATP synthase delta chain, chloroplastic-like [Cucumis
           sativus] gi|449478221|ref|XP_004155254.1| PREDICTED: ATP
           synthase delta chain, chloroplastic-like [Cucumis
           sativus]
          Length = 227

 Score =  139 bits (349), Expect = 8e-31
 Identities = 86/220 (39%), Positives = 128/220 (58%), Gaps = 6/220 (2%)
 Frame = -1

Query: 735 STPREFNLFKPPNPNHVLPPDHSHLYNNKSNTFFNRP--TSFFPNKAPVFTSP---FNYT 571
           +TP   +  + P+       D  HL N  ++     P  TS   +K P F S     N +
Sbjct: 5   TTPSVSSALRVPSRTLTSSRDFLHLKNPTAHLPHRSPSRTSNSISKPPNFLSTPQTLNPS 64

Query: 570 TPISS-LKAALPIVNRKATSGYAAALLDIARCDNTLDIVDKDVRRLSRLLHNADIRAIMV 394
            P S+  +++ P+++R+  SGYAAALLD ++   T+  V KDV R S+LL    I  ++ 
Sbjct: 65  IPFSTPRRSSSPLLHRRPASGYAAALLDASQSTGTIHSVAKDVGRFSKLLRGKRIGRVLN 124

Query: 393 NPLINANXXXXXXXXXXXRGKFQRHLVVVLKMLVGKNKVEMVTEVLEDFLRIYDELNGTR 214
           +PL+              +G F+R +V + KML+ K+K+ ++TEV  +F R+YDEL GT 
Sbjct: 125 DPLVGDEEKGRLVKEIAVKGGFERQVVKLTKMLIEKSKLSILTEVFSEFERVYDELCGTE 184

Query: 213 VVLVSCAKNMEEDKLFGIAKKVQRMSGAMKVKVRNLIREG 94
           VV+VS +K MEE++L GIAK VQR+SGA+KVKVR+ I  G
Sbjct: 185 VVMVSSSKKMEEEELIGIAKNVQRLSGAIKVKVRSFIHGG 224


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