BLASTX nr result

ID: Coptis23_contig00028684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028684
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002489165.1| hypothetical protein SORBIDRAFT_0015s007030 ...    65   6e-09
gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Ja...    60   1e-07
ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group] g...    60   1e-07
gb|EEE60843.1| hypothetical protein OsJ_14468 [Oryza sativa Japo...    60   1e-07
gb|EEE50811.1| hypothetical protein OsJ_31200 [Oryza sativa Japo...    60   1e-07

>ref|XP_002489165.1| hypothetical protein SORBIDRAFT_0015s007030 [Sorghum bicolor]
           gi|241947177|gb|EES20322.1| hypothetical protein
           SORBIDRAFT_0015s007030 [Sorghum bicolor]
          Length = 933

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/85 (38%), Positives = 46/85 (54%)
 Frame = +1

Query: 4   GYYTWSNKQIFPNLVKVCLDKAFACPDWSSQHPNTTVLNLPIAVSDHSFIVLNTDPVQYK 183
           G YTWSN Q  P L K  LD+     +W    PNT V  LP  +SDH+ ++L +   Q  
Sbjct: 184 GVYTWSNNQEDPILEK--LDRILISREWEDIFPNTMVKRLPRELSDHNPLILCSGAGQVT 241

Query: 184 KPYQFHFQCSWLEDASCAPTIQRSW 258
           K  +F F+ SWL +    P+++R W
Sbjct: 242 KHIEFRFELSWLTNPEFLPSVERIW 266


>gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1739

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/87 (36%), Positives = 45/87 (51%)
 Frame = +1

Query: 10   YTWSNKQIFPNLVKVCLDKAFACPDWSSQHPNTTVLNLPIAVSDHSFIVLNTDPVQYKKP 189
            YTWSNKQ   +LV   LD+  A  +W   +PNTTV +LP+  SDH+ I+   +P   +  
Sbjct: 951  YTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILNPKNRRPK 1010

Query: 190  YQFHFQCSWLEDASCAPTIQRSWLTHV 270
              F F+  WL +         +WL  V
Sbjct: 1011 RSFMFENWWLLEPDFNQHAHSAWLQSV 1037


>ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group]
           gi|255679325|dbj|BAH94828.1| Os10g0351414 [Oryza sativa
           Japonica Group]
          Length = 912

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/87 (36%), Positives = 45/87 (51%)
 Frame = +1

Query: 10  YTWSNKQIFPNLVKVCLDKAFACPDWSSQHPNTTVLNLPIAVSDHSFIVLNTDPVQYKKP 189
           YTWSNKQ   +LV   LD+  A  +W   +PNTTV +LP+  SDH+ I+   +P   +  
Sbjct: 175 YTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILNPKNRRPK 234

Query: 190 YQFHFQCSWLEDASCAPTIQRSWLTHV 270
             F F+  WL +         +WL  V
Sbjct: 235 RSFMFENWWLLEPDFNQHAHSAWLQSV 261


>gb|EEE60843.1| hypothetical protein OsJ_14468 [Oryza sativa Japonica Group]
          Length = 1668

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/87 (36%), Positives = 45/87 (51%)
 Frame = +1

Query: 10   YTWSNKQIFPNLVKVCLDKAFACPDWSSQHPNTTVLNLPIAVSDHSFIVLNTDPVQYKKP 189
            YTWSNKQ   +LV   LD+  A  +W   +PNTTV +LP+  SDH+ I+   +P   +  
Sbjct: 775  YTWSNKQQGKDLVLERLDRCLANVEWCFDYPNTTVYHLPMLYSDHAPIIAILNPKNRRPK 834

Query: 190  YQFHFQCSWLEDASCAPTIQRSWLTHV 270
              F F+  WL +         +WL  V
Sbjct: 835  RSFMFENWWLLEPDFNQHAHSAWLQSV 861


>gb|EEE50811.1| hypothetical protein OsJ_31200 [Oryza sativa Japonica Group]
          Length = 881

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/87 (36%), Positives = 45/87 (51%)
 Frame = +1

Query: 10  YTWSNKQIFPNLVKVCLDKAFACPDWSSQHPNTTVLNLPIAVSDHSFIVLNTDPVQYKKP 189
           YTWSNKQ   +LV   LD+  A  +W   +PNTTV +LP+  SDH+ I+   +P   +  
Sbjct: 39  YTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILNPKNRRPK 98

Query: 190 YQFHFQCSWLEDASCAPTIQRSWLTHV 270
             F F+  WL +         +WL  V
Sbjct: 99  RSFMFENWWLLEPDFNQHAHSAWLQSV 125


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