BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028661
         (1137 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   135   1e-29
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   132   2e-28
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   129   1e-27
ref|XP_002531145.1| conserved hypothetical protein [Ricinus comm...   126   1e-26
ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-26

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
            gi|222854763|gb|EEE92310.1| f-box family protein [Populus
            trichocarpa]
          Length = 396

 Score =  135 bits (341), Expect = 1e-29
 Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 16/303 (5%)
 Frame = -1

Query: 1077 MSSIPHDIIIDILNRTPATSLLRFKAVSKLWYATISLPSFIKTHLSLAIENDSSDIFLV- 901
            MS +P ++I +IL R PA  LL  ++VSK W A I  P+F+K HL  +++  SS+++++ 
Sbjct: 1    MSGLPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDT-SSNLYIIL 59

Query: 900  ---SHP-CLNRKPLYCISGADSFNESVRIANPLGRFADVCEILGACNGIVCLS-VRNVIC 736
               SH   ++ +    ++   +  E   + +PL  +    ++LG+ NG++C+S V + I 
Sbjct: 60   RTTSHVHYMDFEQNLVLNDCVTLKE---LNHPLMCYNHGIKVLGSVNGLLCISNVVDDIA 116

Query: 735  LLNPATKEYKIVKF-----RKKFRVNFRNAY--GLGYDPRTEVYKLVEFVQFYTEGPR-F 580
            + NP+T+++++V F     ++ F     + Y  G GYD   + YKLV   QF   G R F
Sbjct: 117  VWNPSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSF 176

Query: 579  DSHYKANVYSFDDTLSLTEFDIPYSFENRRRLGVYVNGGLHWIATRR--SNFYTAILCYD 406
            +S  K  VYS          D+PY        GV+ NG LHW+      SN    ++  D
Sbjct: 177  ESEVK--VYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIVVALD 234

Query: 405  VGEDVCREVAPPIDVELFTLVTLGDLGGQLCTACWSCNRDVDVWVMKSYGDRGSWSKLFS 226
            +G +  REV  P   +    + LG L G LC         VDVW+MK YG + SW+KLFS
Sbjct: 235  LGVEDYREVLQPEYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFS 294

Query: 225  FAE 217
             A+
Sbjct: 295  VAQ 297


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
            gi|355511583|gb|AES92725.1| F-box family protein
            [Medicago truncatula]
          Length = 392

 Score =  132 bits (332), Expect = 2e-28
 Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 15/302 (4%)
 Frame = -1

Query: 1077 MSSIPHDIIIDILNRTPATSLLRFKAVSKLWYATISLPSFIKTHLSLAIENDSSDIFLVS 898
            M+ +P ++  +IL+R PA  LLR ++  K W   I    FI  HLS   ++  S I L  
Sbjct: 1    MADLPTEVTTEILSRVPAKPLLRLRSTCKWWRNLIDSTDFIFLHLS---KSRDSVIILRQ 57

Query: 897  HPCLNRKPLYCISGADSFNESVRIANPLGRFADVCEILGACNGIVCL-SVRNVICLLNPA 721
            H  L    L      +S +    + +PL  +++  ++LG+CNG++C+ ++ + I   NP 
Sbjct: 58   HSRLYELDL------NSMDRVKELDHPLMCYSNRIKVLGSCNGLLCICNIADDIAFWNPT 111

Query: 720  TKEYKIVK----FRKKFRVN-------FRNAYGLGYDPRTEVYKLVEFVQFYTEGPR-FD 577
             ++++I+      RK+   N         + YG GYD  T+ YKLV    F     R FD
Sbjct: 112  IRKHRIIPSEPLIRKETNENNTITTLLAAHVYGFGYDSATDDYKLVSISYFVDLHNRSFD 171

Query: 576  SHYKANVYSFDDTLSLTEFDIPYSFENRRRLGVYVNGGLHWIATR--RSNFYTAILCYDV 403
            SH K  +Y+    +  T   +PY+    R +GV+V+G LHW+ TR         I+ +D+
Sbjct: 172  SHVK--IYTMRTDVWKTLPSMPYALCCARTMGVFVSGALHWVVTRDLEPESRDLIVAFDL 229

Query: 402  GEDVCREVAPPIDVELFTLVTLGDLGGQLCTACWSCNRDVDVWVMKSYGDRGSWSKLFSF 223
              +V REVA P  V+    + +  L G LC      +   DVWVM+ YG   SW K+F+ 
Sbjct: 230  RFEVFREVALPGTVDGKFDMDVALLRGMLCIIENRGSDGFDVWVMREYGSHDSWCKMFTV 289

Query: 222  AE 217
             +
Sbjct: 290  GQ 291


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  129 bits (324), Expect = 1e-27
 Identities = 96/302 (31%), Positives = 134/302 (44%), Gaps = 26/302 (8%)
 Frame = -1

Query: 1059 DIIIDILNRTPATSLLRFKAVSKLWYATISLPSFIKTHLSLAIENDSSDIFLVSHPCLNR 880
            +I  DIL+R P  SL RF+ VSK W   I  P FI THL  +     + + L+     N 
Sbjct: 6    EITADILSRLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRS-SQAHTHLNLILRDATN- 63

Query: 879  KPLYCISGADS--FNESVRIANPLGRFADVCEILGACNGIVCLSVRNV-ICLLNPATKEY 709
                C    DS  F       NPL       E++G+CNG++ L   +  I L NP+T+E 
Sbjct: 64   ---LCTVDLDSPDFTSIELKNNPLKSDDCATEVMGSCNGLLALLNSDFSIALYNPSTREK 120

Query: 708  KIVKFRKKFRVN---------FRNAYGLGYDPRTEVYKLVEFVQFYTEGPRFDSHYKANV 556
            K++        N           N YG G+DP  E YK+V F+ FY + P    H +  V
Sbjct: 121  KMIPVSPLELPNDLDDSKVSSLFNFYGFGHDPINEDYKVVRFIHFYGDSPDGFFHCEVKV 180

Query: 555  YSFDDTLSLTEFDIPYSF----------ENRRRLGVYVNGGLHWIAT----RRSNFYTAI 418
            YS          D PY              RR  GV+ N  +HW AT     + N    I
Sbjct: 181  YSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKENGSDLI 240

Query: 417  LCYDVGEDVCREVAPPIDVELFTLVTLGDLGGQLCTACWSCNRDVDVWVMKSYGDRGSWS 238
            + +D+G +  + +  P        + +G LGG LC  C    + V++WVMK YG + SW+
Sbjct: 241  VAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVFCNKNCKQVEIWVMKEYGVKESWT 300

Query: 237  KL 232
             L
Sbjct: 301  HL 302


>ref|XP_002531145.1| conserved hypothetical protein [Ricinus communis]
            gi|223529258|gb|EEF31230.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 427

 Score =  126 bits (316), Expect = 1e-26
 Identities = 102/319 (31%), Positives = 156/319 (48%), Gaps = 28/319 (8%)
 Frame = -1

Query: 1068 IPHDIIIDILNRTPATSLLRFKAVSKLWYATISLPSFIKTHLSLAIENDSSDIF---LVS 898
            IP D++I+IL +    ++LR + VSK W A I  P FIK H   AI+ ++S IF   L  
Sbjct: 5    IPRDLLIEILIQCQIPTILRCRCVSKQWRALIDDPQFIKQHTDYAIQTNASRIFFNELFG 64

Query: 897  HPCLNRKPLYCISGADSFNESVRIAN-PLGRFADVCEILGACNGIVCLSVRNV----ICL 733
            + C    PL          +++ I N P+        ++G+CNG++CL  RNV    IC+
Sbjct: 65   NLC--SSPL----------DTLEIRNVPIISQVQPVSLVGSCNGLLCL--RNVDTQDICI 110

Query: 732  LNPATKEYKIVK------FRKKFRVNFRNAYGLGYDPRTEVYKLVEFVQFYTEGPRFDSH 571
            +NPAT+++  ++       R +        YG GYD   + YK+V   Q     PR ++ 
Sbjct: 111  MNPATRKHMYLQNLLPNNCRDEQNKVSLTGYGFGYDCVNDDYKVVRIAQKIDAEPRINN- 169

Query: 570  YKANVYSFDDTLS--------LTEFDIPYSFENRRRLGVYVNGGLHWIATRRSNFYT--- 424
               N+   +  +S        L    +PY F     LGV   G LHW+  + ++  +   
Sbjct: 170  --GNLGFLETEMSICNVKTRVLKVVKMPY-FTLVNDLGVLACGALHWLMGKYNDVTSLKK 226

Query: 423  -AILCYDVGEDVCREVAPPIDVELFTL-VTLGDLGGQLC-TACWSCNRDVDVWVMKSYGD 253
              I+ YD+G D  RE++ P  +        +G LG  LC +A ++    +D WVMK YGD
Sbjct: 227  KLIVGYDLGTDEFRELSQPEFLNHDNCRKNIGLLGTWLCLSANYNPEEGIDFWVMKEYGD 286

Query: 252  RGSWSKLFSFAEDLLPIRY 196
            + SW+ LFSF    +P RY
Sbjct: 287  KESWTMLFSFPITFIPCRY 305


>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
            predicted protein [Populus trichocarpa]
          Length = 445

 Score =  125 bits (313), Expect = 3e-26
 Identities = 110/352 (31%), Positives = 170/352 (48%), Gaps = 27/352 (7%)
 Frame = -1

Query: 1119 NLSPPP----RQKKIN*TMSSIPHDIIIDILNRTPATSLLRFKAVSKLWYATISLPSFIK 952
            NLSPP     R KK    + ++PH++II+IL+R PA SL++F+ VSK + + IS P FIK
Sbjct: 58   NLSPPQTNKKRTKKTPPPLPNLPHELIIEILSRLPAKSLIKFRCVSKSFKSLISNPQFIK 117

Query: 951  THLSLA---IEND---SSDIFLVSHPCLNRKPLYCISGADSFNESVRIANPLGRF--ADV 796
            THL        ND   S +I + S   L R  L   S    +N  V  A  +  +   D+
Sbjct: 118  THLEKVKNLSRNDPDFSPEIVISSSEPLFR--LKSCSLYSVYNNPVTDAVVIDYYLLKDI 175

Query: 795  CE---ILGACNGIVCLSVR-NVICLLNPATKEYKIVK---FRKKFRVNFRNAYGLGYDPR 637
                 ++G+C+G+VCL ++ + + L NP+T+ +  +    F KK  +     +G GYD +
Sbjct: 176  YRYDWVVGSCDGLVCLGIKQDFVVLWNPSTRVFNRLPDLGFAKK--LGSYTVFGFGYDSQ 233

Query: 636  TEVYKLVEFVQFYTE----GPRFDSHYKANVYSFDDTLSLTEF--DIPYSFENRRRLGVY 475
             + YK++    F T+    G R+ +  K      +    L +F   +PY        G +
Sbjct: 234  IDDYKVLAMFCFLTKSVYGGSRYVTRIKVCALKGECWRRLEDFGLGLPYDVS-----GKH 288

Query: 474  VNGGLHWIATRRSNFYTA--ILCYDVGEDVCREVAPPIDVELFTLVTLGDLGGQLCTACW 301
            V+G L W      +  +A  I+ +D+ +++  EV  P    +     LG L G LC  C 
Sbjct: 289  VDGKLCWPVMPEGSIGSAWSIVAFDLAQEMFEEVVQPDYGAVGYERVLGVLQGWLCVMCN 348

Query: 300  SCNRDVDVWVMKSYGDRGSWSKLFSFAEDLLPIRYPPVVAFRFSGNGSVLLQ 145
                  DVWV+K +G R SW+KLFS      P+ +   V       G VLL+
Sbjct: 349  YQGVRADVWVLKEFGVRDSWTKLFSIPYLDDPLWFHYSVPLCIDVGGEVLLE 400