BLASTX nr result

ID: Coptis23_contig00028658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028658
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276974.2| PREDICTED: uncharacterized protein LOC100266...    60   2e-07
ref|XP_002314392.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_004163099.1| PREDICTED: uncharacterized protein LOC101229...    55   5e-06
ref|XP_004152945.1| PREDICTED: uncharacterized LOC101214290 [Cuc...    55   5e-06
ref|XP_004145045.1| PREDICTED: uncharacterized protein LOC101217...    55   5e-06

>ref|XP_002276974.2| PREDICTED: uncharacterized protein LOC100266667 [Vitis vinifera]
          Length = 1294

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/65 (52%), Positives = 40/65 (61%)
 Frame = +2

Query: 38   SPTEGAEANASLDASPAGKANLSGTASVTPSSCTTPINAASPVCIGNGYHKQSCRKSLSR 217
            SP EG E NA L          SG+   TP +  TP NAASPVC+GN Y KQSC+K+L R
Sbjct: 979  SPAEGREGNAGLREM----CKPSGSVCTTPVNSVTPTNAASPVCMGNEYVKQSCKKNL-R 1033

Query: 218  PSLVK 232
             SL+K
Sbjct: 1034 TSLLK 1038


>ref|XP_002314392.1| predicted protein [Populus trichocarpa] gi|222863432|gb|EEF00563.1|
            predicted protein [Populus trichocarpa]
          Length = 1102

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = +2

Query: 38   SPTEGAEANA-SLDASPAGKANLSGTASVTPSSCTTPINAASPVCIGNGYHKQSCRKSLS 214
            SP+   E N  S D     K     +A  +P  C TP+NAASPVC+G+ Y KQSCRK+LS
Sbjct: 821  SPSAANEVNVPSSDNLSREKTKSYESACASPGICMTPVNAASPVCMGSEY-KQSCRKNLS 879

Query: 215  RPSLVK 232
            R  LVK
Sbjct: 880  RACLVK 885


>ref|XP_004163099.1| PREDICTED: uncharacterized protein LOC101229012 [Cucumis sativus]
          Length = 1163

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = +2

Query: 74   DASPAGKANLSGTASVTPS-SCTTPINAASPVCIGNGYHKQSCRKSLSRPSLVK 232
            D SP+ +   S T   +PS +  TPIN+ SPVC+G+ Y+KQSC+K+LS+ SL+K
Sbjct: 856  DESPSKRHKPSVTVCTSPSDNSMTPINSVSPVCMGSEYYKQSCKKNLSKSSLLK 909


>ref|XP_004152945.1| PREDICTED: uncharacterized LOC101214290 [Cucumis sativus]
          Length = 917

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = +2

Query: 74  DASPAGKANLSGTASVTPS-SCTTPINAASPVCIGNGYHKQSCRKSLSRPSLVK 232
           D SP+ +   S T   +PS +  TPIN+ SPVC+G+ Y+KQSC+K+LS+ SL+K
Sbjct: 610 DESPSKRHKPSVTVCTSPSDNSMTPINSVSPVCMGSEYYKQSCKKNLSKSSLLK 663


>ref|XP_004145045.1| PREDICTED: uncharacterized protein LOC101217520 [Cucumis sativus]
          Length = 1153

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = +2

Query: 74   DASPAGKANLSGTASVTPS-SCTTPINAASPVCIGNGYHKQSCRKSLSRPSLVK 232
            D SP+ +   S T   +PS +  TPIN+ SPVC+G+ Y+KQSC+K+LS+ SL+K
Sbjct: 846  DESPSKRHKPSVTVCTSPSDNSMTPINSVSPVCMGSEYYKQSCKKNLSKSSLLK 899


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