BLASTX nr result
ID: Coptis23_contig00028655
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00028655
(609 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265340.1| PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA... 138 6e-45
ref|XP_002297858.1| predicted protein [Populus trichocarpa] gi|2... 132 2e-43
ref|XP_002514862.1| Delta3,5-delta2,4-dienoyl-CoA isomerase, mit... 127 1e-41
ref|NP_199142.1| delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 [... 125 9e-41
ref|NP_001078698.1| delta(3,5),delta(2,4)-dienoyl-CoA isomerase ... 125 9e-41
>ref|XP_002265340.1| PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase,
mitochondrial [Vitis vinifera]
gi|296088718|emb|CBI38168.3| unnamed protein product
[Vitis vinifera]
Length = 275
Score = 138 bits (348), Expect(2) = 6e-45
Identities = 70/103 (67%), Positives = 83/103 (80%), Gaps = 1/103 (0%)
Frame = -3
Query: 574 MAEYKCLQIIESTPNSSIFYLYLNNPSLKNALSRDFFIEFPKALSSLDQNPNVRVIILAG 395
M YK L+I++ +P SS+F+L LN PSL+NALS DFF EFPKAL SLDQNPNV VIIL+G
Sbjct: 1 MENYKTLEIVQRSPKSSVFHLNLNRPSLRNALSLDFFSEFPKALDSLDQNPNVSVIILSG 60
Query: 394 QGTHFCSGIDLKTLNSIT-NSQTNDQGRVRERLRREIKGLQDA 269
G HFCSGIDLK L+SI+ SQ++D+GR ERLRR IK LQDA
Sbjct: 61 NGAHFCSGIDLKVLDSISERSQSSDRGRTGERLRRHIKFLQDA 103
Score = 68.2 bits (165), Expect(2) = 6e-45
Identities = 34/57 (59%), Positives = 38/57 (66%)
Frame = -1
Query: 171 IERCRKPVIVSVHXXXXXXXXXXXXXXXIRYCTEDAFFTVKEVDLGITADLGTLQRL 1
IE CRKPVI +H IR+CTEDAFF+VKEVDL ITAD+GTLQRL
Sbjct: 107 IEHCRKPVIAGIHGACIGAGIDVVTACDIRFCTEDAFFSVKEVDLAITADVGTLQRL 163
>ref|XP_002297858.1| predicted protein [Populus trichocarpa] gi|222845116|gb|EEE82663.1|
predicted protein [Populus trichocarpa]
Length = 273
Score = 132 bits (332), Expect(2) = 2e-43
Identities = 66/102 (64%), Positives = 77/102 (75%)
Frame = -3
Query: 574 MAEYKCLQIIESTPNSSIFYLYLNNPSLKNALSRDFFIEFPKALSSLDQNPNVRVIILAG 395
M YK L + + +PNS +F L LN PS +NALSRDFF EFP AL SLDQNPN VI+L+G
Sbjct: 1 MEHYKTLHVFQKSPNSGVFQLNLNRPSQRNALSRDFFTEFPIALQSLDQNPNASVIVLSG 60
Query: 394 QGTHFCSGIDLKTLNSITNSQTNDQGRVRERLRREIKGLQDA 269
G HFCSGID+KTLNSI N + D+GR ERLRR+IK LQDA
Sbjct: 61 TGDHFCSGIDIKTLNSIAN-DSGDRGRSGERLRRDIKFLQDA 101
Score = 69.7 bits (169), Expect(2) = 2e-43
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = -1
Query: 171 IERCRKPVIVSVHXXXXXXXXXXXXXXXIRYCTEDAFFTVKEVDLGITADLGTLQRL 1
IERCRKPVI ++ IRYC+EDAFF+VKEVDLG+TADLGTLQRL
Sbjct: 105 IERCRKPVIAAIKGACIGGGIDIVTACDIRYCSEDAFFSVKEVDLGLTADLGTLQRL 161
>ref|XP_002514862.1| Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial precursor,
putative [Ricinus communis] gi|223545913|gb|EEF47416.1|
Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial
precursor, putative [Ricinus communis]
Length = 275
Score = 127 bits (318), Expect(2) = 1e-41
Identities = 64/103 (62%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
Frame = -3
Query: 574 MAEYKCLQIIESTPNSSIFYLYLNNPSLKNALSRDFFIEFPKALSSLDQNPNVRVIILAG 395
M Y+ L+II+ PNS + +LYLN P +NALS DFF E P ALS LDQ+PNV VIILAG
Sbjct: 1 MDRYRTLKIIQKIPNSPVVHLYLNRPHQRNALSHDFFTELPNALSCLDQDPNVSVIILAG 60
Query: 394 QGTHFCSGIDLKTLNSIT-NSQTNDQGRVRERLRREIKGLQDA 269
G HFCSGIDLKT NSIT + + D+GR E+LRR+IK LQ+A
Sbjct: 61 AGDHFCSGIDLKTFNSITEQTLSGDRGRANEKLRRQIKYLQEA 103
Score = 68.6 bits (166), Expect(2) = 1e-41
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = -1
Query: 171 IERCRKPVIVSVHXXXXXXXXXXXXXXXIRYCTEDAFFTVKEVDLGITADLGTLQRL 1
IE+CRKPVI S+H IR+C +D+FF+VKEVDLG+TADLGTLQRL
Sbjct: 107 IEKCRKPVIASIHGACIGGGVDIVTACDIRFCCQDSFFSVKEVDLGLTADLGTLQRL 163
>ref|NP_199142.1| delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 [Arabidopsis
thaliana] gi|10177390|dbj|BAB10591.1| enoyl CoA
hydratase-like protein [Arabidopsis thaliana]
gi|18252833|gb|AAL62343.1| enoyl CoA hydratase-like
protein [Arabidopsis thaliana]
gi|25084271|gb|AAN72209.1| enoyl CoA hydratase-like
protein [Arabidopsis thaliana]
gi|332007553|gb|AED94936.1|
delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1
[Arabidopsis thaliana]
Length = 278
Score = 125 bits (313), Expect(2) = 9e-41
Identities = 65/104 (62%), Positives = 80/104 (76%), Gaps = 2/104 (1%)
Frame = -3
Query: 574 MAEYKCLQIIESTPNSSIFYLYLNNPSLKNALSRDFFIEFPKALSSLDQNPNVRVIILAG 395
M YK L+II +SS+F+L +N PS NALS DFFIEFPKALSSLDQNP+V VIIL+G
Sbjct: 3 MESYKTLEIIRKNTDSSVFHLIINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIILSG 62
Query: 394 QGTHFCSGIDLKTLNSIT--NSQTNDQGRVRERLRREIKGLQDA 269
G HFCSGIDL +L+SI+ +S ND+GR E+LRR+IK +Q A
Sbjct: 63 AGKHFCSGIDLNSLSSISTQSSSGNDRGRSSEQLRRKIKSMQAA 106
Score = 67.8 bits (164), Expect(2) = 9e-41
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -1
Query: 171 IERCRKPVIVSVHXXXXXXXXXXXXXXXIRYCTEDAFFTVKEVDLGITADLGTLQRL 1
IE+CRKPVI ++H IRYC+EDAFF++KEVDL I ADLGTLQRL
Sbjct: 110 IEQCRKPVIAAIHGACIGGGVDLITACDIRYCSEDAFFSIKEVDLAIVADLGTLQRL 166
>ref|NP_001078698.1| delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 [Arabidopsis
thaliana] gi|222423431|dbj|BAH19686.1| AT5G43280
[Arabidopsis thaliana] gi|332007554|gb|AED94937.1|
delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1
[Arabidopsis thaliana]
Length = 220
Score = 125 bits (313), Expect(2) = 9e-41
Identities = 65/104 (62%), Positives = 80/104 (76%), Gaps = 2/104 (1%)
Frame = -3
Query: 574 MAEYKCLQIIESTPNSSIFYLYLNNPSLKNALSRDFFIEFPKALSSLDQNPNVRVIILAG 395
M YK L+II +SS+F+L +N PS NALS DFFIEFPKALSSLDQNP+V VIIL+G
Sbjct: 3 MESYKTLEIIRKNTDSSVFHLIINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIILSG 62
Query: 394 QGTHFCSGIDLKTLNSIT--NSQTNDQGRVRERLRREIKGLQDA 269
G HFCSGIDL +L+SI+ +S ND+GR E+LRR+IK +Q A
Sbjct: 63 AGKHFCSGIDLNSLSSISTQSSSGNDRGRSSEQLRRKIKSMQAA 106
Score = 67.8 bits (164), Expect(2) = 9e-41
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -1
Query: 171 IERCRKPVIVSVHXXXXXXXXXXXXXXXIRYCTEDAFFTVKEVDLGITADLGTLQRL 1
IE+CRKPVI ++H IRYC+EDAFF++KEVDL I ADLGTLQRL
Sbjct: 110 IEQCRKPVIAAIHGACIGGGVDLITACDIRYCSEDAFFSIKEVDLAIVADLGTLQRL 166