BLASTX nr result

ID: Coptis23_contig00028647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028647
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155751.1| PREDICTED: potassium channel SKOR-like [Cucu...    87   1e-19
ref|XP_004140369.1| PREDICTED: potassium channel SKOR-like [Cucu...    87   1e-19
emb|CAD35400.1| shaker-like potassium channel [Vitis vinifera]         83   9e-19
ref|XP_002262949.1| PREDICTED: potassium channel SKOR [Vitis vin...    83   9e-19
emb|CAN64951.1| hypothetical protein VITISV_022830 [Vitis vinifera]    83   9e-19

>ref|XP_004155751.1| PREDICTED: potassium channel SKOR-like [Cucumis sativus]
          Length = 828

 Score = 87.4 bits (215), Expect(2) = 1e-19
 Identities = 46/65 (70%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   LEGKEYN-QVKKIESDSTYRIGKQEADLALKVNSAFYCGDLYQLTGFIGAGGDLNKTDYY 179
           LEGKE N +VK++ESD T+ IGKQEA+LALKVNSA Y GDLYQL G + AG D NKTDY 
Sbjct: 520 LEGKETNLRVKQLESDITFHIGKQEAELALKVNSAAYHGDLYQLKGLVRAGADPNKTDYD 579

Query: 180 GGSPL 194
           G SPL
Sbjct: 580 GRSPL 584



 Score = 33.9 bits (76), Expect(2) = 1e-19
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +2

Query: 194 DNFGNTPLFEAIKNG 238
           DNFGNTPL EAIKNG
Sbjct: 610 DNFGNTPLMEAIKNG 624


>ref|XP_004140369.1| PREDICTED: potassium channel SKOR-like [Cucumis sativus]
          Length = 828

 Score = 87.4 bits (215), Expect(2) = 1e-19
 Identities = 46/65 (70%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   LEGKEYN-QVKKIESDSTYRIGKQEADLALKVNSAFYCGDLYQLTGFIGAGGDLNKTDYY 179
           LEGKE N +VK++ESD T+ IGKQEA+LALKVNSA Y GDLYQL G + AG D NKTDY 
Sbjct: 520 LEGKETNLRVKQLESDITFHIGKQEAELALKVNSAAYHGDLYQLKGLVRAGADPNKTDYD 579

Query: 180 GGSPL 194
           G SPL
Sbjct: 580 GRSPL 584



 Score = 33.9 bits (76), Expect(2) = 1e-19
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +2

Query: 194 DNFGNTPLFEAIKNG 238
           DNFGNTPL EAIKNG
Sbjct: 610 DNFGNTPLMEAIKNG 624


>emb|CAD35400.1| shaker-like potassium channel [Vitis vinifera]
          Length = 795

 Score = 83.2 bits (204), Expect(2) = 9e-19
 Identities = 44/65 (67%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   LEGKEYN-QVKKIESDSTYRIGKQEADLALKVNSAFYCGDLYQLTGFIGAGGDLNKTDYY 179
           LEGKE N +VK++ESD T+ IG+QEA+LAL+VNSA Y GDLYQL   I AG D NKTDY 
Sbjct: 484 LEGKESNLRVKQLESDITFHIGRQEAELALRVNSASYHGDLYQLKSLIRAGADPNKTDYD 543

Query: 180 GGSPL 194
           G SPL
Sbjct: 544 GRSPL 548



 Score = 35.0 bits (79), Expect(2) = 9e-19
 Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 15/37 (40%)
 Frame = +2

Query: 191 SDNFGNTPLFEAIKNG---------------KIDDAG 256
           SDNFGNTPL EAIKN                KIDDAG
Sbjct: 573 SDNFGNTPLLEAIKNAHDRVASLLVNKGALLKIDDAG 609


>ref|XP_002262949.1| PREDICTED: potassium channel SKOR [Vitis vinifera]
           gi|296087079|emb|CBI33453.3| unnamed protein product
           [Vitis vinifera]
          Length = 794

 Score = 83.2 bits (204), Expect(2) = 9e-19
 Identities = 44/65 (67%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   LEGKEYN-QVKKIESDSTYRIGKQEADLALKVNSAFYCGDLYQLTGFIGAGGDLNKTDYY 179
           LEGKE N +VK++ESD T+ IG+QEA+LAL+VNSA Y GDLYQL   I AG D NKTDY 
Sbjct: 484 LEGKESNLRVKQLESDITFHIGRQEAELALRVNSASYHGDLYQLKSLIRAGADPNKTDYD 543

Query: 180 GGSPL 194
           G SPL
Sbjct: 544 GRSPL 548



 Score = 35.0 bits (79), Expect(2) = 9e-19
 Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 15/37 (40%)
 Frame = +2

Query: 191 SDNFGNTPLFEAIKNG---------------KIDDAG 256
           SDNFGNTPL EAIKN                KIDDAG
Sbjct: 573 SDNFGNTPLLEAIKNAHDRVASLLVNKGALLKIDDAG 609


>emb|CAN64951.1| hypothetical protein VITISV_022830 [Vitis vinifera]
          Length = 559

 Score = 83.2 bits (204), Expect(2) = 9e-19
 Identities = 44/65 (67%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   LEGKEYN-QVKKIESDSTYRIGKQEADLALKVNSAFYCGDLYQLTGFIGAGGDLNKTDYY 179
           LEGKE N +VK++ESD T+ IG+QEA+LAL+VNSA Y GDLYQL   I AG D NKTDY 
Sbjct: 249 LEGKESNLRVKQLESDITFHIGRQEAELALRVNSASYHGDLYQLKSLIRAGADPNKTDYD 308

Query: 180 GGSPL 194
           G SPL
Sbjct: 309 GRSPL 313



 Score = 35.0 bits (79), Expect(2) = 9e-19
 Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 15/37 (40%)
 Frame = +2

Query: 191 SDNFGNTPLFEAIKNG---------------KIDDAG 256
           SDNFGNTPL EAIKN                KIDDAG
Sbjct: 338 SDNFGNTPLLEAIKNAHDRVASLLVNKGALLKIDDAG 374


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