BLASTX nr result

ID: Coptis23_contig00028631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028631
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522728.1| DNA binding protein, putative [Ricinus commu...    71   8e-11
emb|CBI25742.3| unnamed protein product [Vitis vinifera]               68   7e-10
ref|XP_002300373.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_003532169.1| PREDICTED: uncharacterized protein LOC100809...    64   1e-08
ref|XP_002308808.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_002522728.1| DNA binding protein, putative [Ricinus communis]
           gi|223537966|gb|EEF39579.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 683

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/53 (60%), Positives = 37/53 (69%)
 Frame = +3

Query: 3   RLTVRPYPPSQDLAKVVFEIGSPVDAVWNYGWWEGVVTGIDNCENDKLQVYFP 161
           R T+RP PP  +      EIGS VDA W+ GWWEGVVTGID+  +D LQVYFP
Sbjct: 459 RPTIRPVPPQNEQTDHALEIGSAVDAWWSDGWWEGVVTGIDSSTDDILQVYFP 511


>emb|CBI25742.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/53 (56%), Positives = 37/53 (69%)
 Frame = +3

Query: 3   RLTVRPYPPSQDLAKVVFEIGSPVDAVWNYGWWEGVVTGIDNCENDKLQVYFP 161
           RLT+RP+PP +D  +  FE+G+ VDA W  GWWEGVVT +    ND LQVY P
Sbjct: 254 RLTIRPFPP-EDCTEYTFEVGAAVDAWWGDGWWEGVVTRVGISGNDSLQVYLP 305


>ref|XP_002300373.1| predicted protein [Populus trichocarpa] gi|222847631|gb|EEE85178.1|
           predicted protein [Populus trichocarpa]
          Length = 655

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/65 (52%), Positives = 40/65 (61%)
 Frame = +3

Query: 3   RLTVRPYPPSQDLAKVVFEIGSPVDAVWNYGWWEGVVTGIDNCENDKLQVYFPVSVSIYS 182
           R T+RP PP  +      E+GS VDA W+ GWWEGVVT IDN   D LQVYFP       
Sbjct: 426 RPTMRPAPPPNEQTDPALEVGSAVDAWWSDGWWEGVVTKIDNNGGDVLQVYFP------- 478

Query: 183 GEDIF 197
           GE++F
Sbjct: 479 GENLF 483


>ref|XP_003532169.1| PREDICTED: uncharacterized protein LOC100809407 [Glycine max]
          Length = 698

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = +3

Query: 3   RLTVRPYPPSQDLAKVVFEIGSPVDAVWNYGWWEGVVTGIDNCENDKLQVYFP 161
           R T+RP P  ++  ++  E+GS VDA W+ GWWEGVVT IDNC +D ++V+FP
Sbjct: 461 RPTIRPAPTYEE-QELAVEVGSAVDAWWSDGWWEGVVTRIDNCGDDSVEVHFP 512


>ref|XP_002308808.1| predicted protein [Populus trichocarpa] gi|222854784|gb|EEE92331.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = +3

Query: 3   RLTVRPYPPSQDLAKVVFEIGSPVDAVWNYGWWEGVVTGIDNCENDKLQVYFP 161
           R T+RP+P +     + FE+G+PVDA W+ GWWEGVV+G+D   +D LQVY P
Sbjct: 463 RKTIRPHPQNHSTDHI-FEVGAPVDAWWSDGWWEGVVSGVDISGSDCLQVYLP 514


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